Non-Coding RNA Search

Ss1.1-rnms29_g21.5

Sequence:


               
               TTTTTTTTTTTTTGCAGACAGAAGCTGGCAAACTTTATTATTAGATTTCCCCCAACTTGC
CTCCCCATTCTGGGTAAAGAAATAACTTCTTTCCTTCACAGCACACAGTCAACTAAGGTT
CTTACTGTGGCAACTTTATTACAGCTAGAAACACAAATTTGGCCAAGAAGGCCAGCTGAT
AACTCAACCATGATATAATTAAAAAAAAAAGTTAACGGAGAAGCCTTTATTCAGTAACAC
AGAGCCTAACACATTGTTATATTGCAAGGCAGAATAAAGCTACAAAAAGTAACAGAATGA
GAATGAAGAGCAAGAACTATGGCTCTAGATAAGAATTCAACAAGTCAGACAAACTCAGGC
ACTCGGCTGAAATGGCCTAAACCTAAACACAGGTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTGCAGACAGAAGCTGGCAAACTTTATTATTAGATTTCCCCCAACTTGC
CTCCCCATTCTGGGTAAAGAAATAACTTCTTTCCTTCACAGCACACAGTCAACTAAGGTT
CTTACTGTGGCAACTTTATTACAGCTAGAAACACAAATTTGGCCAAGAAGGCCAGCTGAT
AACTCAACCATGATATAATTAAAAAAAAAAGTTAACGGAGAAGCCTTTATTCAGTAACAC
AGAGCCTAACACATTGTTATATTGCAAGGCAGAATAAAGCTACAAAAAGTAACAGAATGA
GAATGAAGAGCAAGAACTATGGCTCTAGATAAGAATTCAACAAGTCAGACAAACTCAGGC
ACTCGGCTGAAATGGCCTAAACCTAAACACAGGTTA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               13-395, gnl|bosTau2|chr5 (18974146-18974528)
               

               
               13-395, gnl|Hg17|chr12 (52156111-52155416)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               13-395, gnl|bosTau2|chr5 (18974146-18974528)
               

               
               13-395, gnl|Hg17|chr12 (52156111-52155416)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nms (0.213858)
               

               
               ebs (0.118301)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nms (0.213858)
               

               
               ebs (0.118301)

	13-395, gnl\|bosTau2\|chr5 (18974146-18974528)
	13-395, gnl\|Hg17\|chr12 (52156111-52155416)