Non-Coding RNA Search

Ss1.1-rnms3633b_c17.5

Sequence:


               
               CTGTGGTTAACAAACAGCTCGGATCCATGTCACTTGACGAGCAACAGGATAACAATAATG
AAAAGCTGAGCCCCAAACCAGGGACAGGTGAACCAGTTTTAAGTTTGCACTACAGCACAG
AAGGAACAACTACAAGCACAATAAAACTGAACTTTACAGATGAATGGAGCAGTACTGCCT
CAAGTTCTAGAGGAAATGGAAGCCACTGCAAAGCTGAGGATCAGGAGGAATCCTTGGTCC
CACAGAGTTCAGTGCAACCACCAGAAGGAGAGACTGAAATAAAATCTCTTGAAGAATCAT
CAGAGGATGTGACACTTCAGGAGGGTACATCTGCAGAAAACACAGTACAGAACCATATAG
ATATAGCACAATCAGATAAACTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGTGGTTAACAAACAGCTCGGATCCATGTCACTTGACGAGCAACAGGATAACAATAATG
AAAAGCTGAGCCCCAAACCAGGGACAGGTGAACCAGTTTTAAGTTTGCACTACAGCACAG
AAGGAACAACTACAAGCACAATAAAACTGAACTTTACAGATGAATGGAGCAGTACTGCCT
CAAGTTCTAGAGGAAATGGAAGCCACTGCAAAGCTGAGGATCAGGAGGAATCCTTGGTCC
CACAGAGTTCAGTGCAACCACCAGAAGGAGAGACTGAAATAAAATCTCTTGAAGAATCAT
CAGAGGATGTGACACTTCAGGAGGGTACATCTGCAGAAAACACAGTACAGAACCATATAG
ATATAGCACAATCAGATAAACTTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               48-167, gnl|bosTau2|chr3 (800533-800652)
               

               
               48-167, gnl|Hg17|chr1 (164739266-164739385)
               

               
               48-167, gnl|Mm7|chr1 (165328447-165328328)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               48-167, gnl|bosTau2|chr3 (800533-800652)
               

               
               48-167, gnl|Hg17|chr1 (164739266-164739385)
               

               
               48-167, gnl|Mm7|chr1 (165328447-165328328)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               nms (0.213858)
               

               
               ssp (0.13552)
               

               
               cty (0.10408)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nms (0.213858)
               

               
               ssp (0.13552)
               

               
               cty (0.10408)

	48-167, gnl\|bosTau2\|chr3 (800533-800652)
	48-167, gnl\|Hg17\|chr1 (164739266-164739385)
	48-167, gnl\|Mm7\|chr1 (165328447-165328328)