Ss1.1-rova002_m22.5
|
TTCGAAGTAGTGTGGCCTTTGTGAGGTTCCACCATGGGCGTACCGTGGCCAGGCCAGAAA
GTGCAGAAGGTGATGGTGCAGCCCATCAACCTCATCTTCAGATACTTGCAAAATAGATCA
CGGATTCAGGTGTGGCTTTATGAGCAAGTGAATATGCGGATAGAGGGCTGTATCATTGGT
TTTGATGAGTATATGAACCTCGTATTAGATGATGCAGAAGAGATTCATTCTAAAACAAAG
TCAAGAAAACAACTGGGTCGGATCATGCTAAAAGGAGATAACATTACTCTGCTCCAAAGT
GTCTCCAACTGAAGTGAGAAGTTGTTGAGAAGGCAGTATGGGGTTTTTGCTCAAAAGGTG
TCCTTTGCTCAACAGGTGTCCTTTGTTGAGAGGGCAGTTCTGAAATATATTCATATTGTT
TTGATGGTCCTTTGTTATTATGAGATAAAAATAAATGCTTTCCTGGTGTTTTTATTAAAA
AAAAAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTCGAAGTAGTGTGGCCTTTGTGAGGTTCCACCATGGGCGTACCGTGGCCAGGCCAGAAA
GTGCAGAAGGTGATGGTGCAGCCCATCAACCTCATCTTCAGATACTTGCAAAATAGATCA
CGGATTCAGGTGTGGCTTTATGAGCAAGTGAATATGCGGATAGAGGGCTGTATCATTGGT
TTTGATGAGTATATGAACCTCGTATTAGATGATGCAGAAGAGATTCATTCTAAAACAAAG
TCAAGAAAACAACTGGGTCGGATCATGCTAAAAGGAGATAACATTACTCTGCTCCAAAGT
GTCTCCAACTGAAGTGAGAAGTTGTTGAGAAGGCAGTATGGGGTTTTTGCTCAAAAGGTG
TCCTTTGCTCAACAGGTGTCCTTTGTTGAGAGGGCAGTTCTGAAATATATTCATATTGTT
TTGATGGTCCTTTGTTATTATGAGATAAAAATAAATGCTTTCCTGGTGTTTTTATTAAAA
AAAAAAAAAAAAAAAAAAAAAAAA
|
|
gi|312005|emb|CAA46626.1| |
Protein identifier
|
gi|312005|emb|CAA46626.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
6-487, gnl|bosTau2|chr11 (20796038-20796508) |
|
6-487, gnl|canFam2|chr1 (96206050-96205749) |
|
6-487, gnl|dasNov1|scaffold_96388 (6495-6207) |
|
6-487, gnl|echTel1|scaffold_216548 (243-547) |
|
6-487, gnl|hg17|chr2 (85400649-85400944) |
|
6-487, gnl|Hg17|chr9 (6739004-6738546) |
|
6-487, gnl|loxAfr1|scaffold_47270 (1042-1354) |
|
6-487, gnl|Mm7|chr2 (131063219-131062794) |
|
6-487, gnl|mm7|chr6 (127016213-127015932) |
|
6-487, gnl|monDom2|scaffold_11 (76691663-76691978) |
|
6-487, gnl|oryCun1|scaffold_163229 (4428-4121) |
|
6-487, gnl|panTro1|chr12 (88264703-88265002) |
|
6-487, gnl|rheMac2|chr13 (85823895-85824177) |
|
6-487, gnl|rn3|chr1 (135621487-135621752) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
6-487, gnl|bosTau2|chr11 (20796038-20796508) |
|
6-487, gnl|canFam2|chr1 (96206050-96205749) |
|
6-487, gnl|dasNov1|scaffold_96388 (6495-6207) |
|
6-487, gnl|echTel1|scaffold_216548 (243-547) |
|
6-487, gnl|hg17|chr2 (85400649-85400944) |
|
6-487, gnl|Hg17|chr9 (6739004-6738546) |
|
6-487, gnl|loxAfr1|scaffold_47270 (1042-1354) |
|
6-487, gnl|Mm7|chr2 (131063219-131062794) |
|
6-487, gnl|mm7|chr6 (127016213-127015932) |
|
6-487, gnl|monDom2|scaffold_11 (76691663-76691978) |
|
6-487, gnl|oryCun1|scaffold_163229 (4428-4121) |
|
6-487, gnl|panTro1|chr12 (88264703-88265002) |
|
6-487, gnl|rheMac2|chr13 (85823895-85824177) |
|
6-487, gnl|rn3|chr1 (135621487-135621752) |
|
elu (1.15607) |
|
fty (1.05504) |
|
ova (1.03306) |
|
vin (0.665115) |
|
mga (0.64082) |
|
sme (0.610874) |
|
aor (0.585823) |
|
cte (0.58548) |
|
csk (0.562984) |
|
sag (0.548145) |
|
cut (0.509771) |
|
nco (0.485201) |
|
cbe (0.478469) |
|
med (0.465008) |
|
hlv (0.417769) |
|
eje (0.395335) |
|
col (0.390016) |
|
nlu (0.383362) |
|
nep (0.36785) |
|
sto (0.359648) |
|
ill (0.351185) |
|
rec (0.346141) |
|
ecc (0.345105) |
|
mcp (0.341297) |
|
eye (0.341006) |
|
spc (0.340097) |
|
pty (0.285429) |
|
che (0.272628) |
|
pla (0.267344) |
|
nmm (0.265604) |
|
thg (0.253582) |
|
ese (0.253004) |
|
mgp (0.230681) |
|
nms (0.213858) |
|
mas (0.210305) |
|
jej (0.197844) |
|
cmu (0.186393) |
|
mgm (0.180343) |
|
ton (0.1755) |
|
sin (0.174948) |
|
duo (0.172801) |
|
cje (0.165235) |
|
ski (0.146735) |
|
nca (0.136874) |
|
lyg (0.133103) |
|
eru (0.120048) |
|
pgl (0.118483) |
|
ebs (0.118301) |
|
jca (0.11396) |
|
nbm (0.0993246) |
|
elu (1.15607) |
|
fty (1.05504) |
|
ova (1.03306) |
|
vin (0.665115) |
|
mga (0.64082) |
|
sme (0.610874) |
|
aor (0.585823) |
|
cte (0.58548) |
|
csk (0.562984) |
|
sag (0.548145) |
|
cut (0.509771) |
|
nco (0.485201) |
|
cbe (0.478469) |
|
med (0.465008) |
|
hlv (0.417769) |
|
eje (0.395335) |
|
col (0.390016) |
|
nlu (0.383362) |
|
nep (0.36785) |
|
sto (0.359648) |
|
ill (0.351185) |
|
rec (0.346141) |
|
ecc (0.345105) |
|
mcp (0.341297) |
|
eye (0.341006) |
|
spc (0.340097) |
|
pty (0.285429) |
|
che (0.272628) |
|
pla (0.267344) |
|
nmm (0.265604) |
|
thg (0.253582) |
|
ese (0.253004) |
|
mgp (0.230681) |
|
nms (0.213858) |
|
mas (0.210305) |
|
jej (0.197844) |
|
cmu (0.186393) |
|
mgm (0.180343) |
|
ton (0.1755) |
|
sin (0.174948) |
|
duo (0.172801) |
|
cje (0.165235) |
|
ski (0.146735) |
|
nca (0.136874) |
|
lyg (0.133103) |
|
eru (0.120048) |
|
pgl (0.118483) |
|
ebs (0.118301) |
|
jca (0.11396) |
|
nbm (0.0993246) |
