Non-Coding RNA Search

Ss1.1-rova002_p18.5

Sequence:


               
               TGACCCGTCACTCGCTTCAGGTGCGTTCACACAGAGCACCCCTCAAGCCACCTCAGGTTT
GAACCTGCTTTTTAACATGTGCGGAACGAAAGAGAACGGATGTGTCCAGCTCTGACTGAA
TCACTCTGTCGTACAGCAGCAATGATCACAACCTTGTAAGTCAATGAAACCTCAATAAAA
CTTAAAAAATAAGATAGGCGGACTGGAATAGCTCCAGTGCCATTCACATCTACTGATAAA
GCAAGTGCCATTCTGATTAGACCCACATCCAATTTCGTCTCTTGGACTATAGTAATGAAA
CAAGATGTATTTTCACAGGATGTTTCAGTATGTCTTCAGTCCTAATTATCCACTTTCAAT
TAAAAAACAAAAAGCCTCAGCACTGCAATATATACCACCGATCATTACATGCCTATCACA
GCTCATATCCGAGTCCCTCAGTGTAAAAGATGGTTGACATTTAGCCGGGAACTTTTAAAA
CACTTGAGGATAAATTATGGCCCAAACTTACTCTTCTTAATGACATGTATAAAGTTCAGC
TCTTTAATAAAAGGTTTCAGGAATAGGAAAACAAAGTTTCCAGCAATATTCAGGAAATAA
AAGGTCTTTGAGAATGGTCAGGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGACCCGTCACTCGCTTCAGGTGCGTTCACACAGAGCACCCCTCAAGCCACCTCAGGTTT
GAACCTGCTTTTTAACATGTGCGGAACGAAAGAGAACGGATGTGTCCAGCTCTGACTGAA
TCACTCTGTCGTACAGCAGCAATGATCACAACCTTGTAAGTCAATGAAACCTCAATAAAA
CTTAAAAAATAAGATAGGCGGACTGGAATAGCTCCAGTGCCATTCACATCTACTGATAAA
GCAAGTGCCATTCTGATTAGACCCACATCCAATTTCGTCTCTTGGACTATAGTAATGAAA
CAAGATGTATTTTCACAGGATGTTTCAGTATGTCTTCAGTCCTAATTATCCACTTTCAAT
TAAAAAACAAAAAGCCTCAGCACTGCAATATATACCACCGATCATTACATGCCTATCACA
GCTCATATCCGAGTCCCTCAGTGTAAAAGATGGTTGACATTTAGCCGGGAACTTTTAAAA
CACTTGAGGATAAATTATGGCCCAAACTTACTCTTCTTAATGACATGTATAAAGTTCAGC
TCTTTAATAAAAGGTTTCAGGAATAGGAAAACAAAGTTTCCAGCAATATTCAGGAAATAA
AAGGTCTTTGAGAATGGTCAGGTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               261-624, gnl|bosTau2|chr18 (37278177-37278529)
               

               
               261-624, gnl|Hg17|chr19 (38976446-38976775)
               

               
               261-624, gnl|Mm7|chr7 (31545138-31544594)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               261-624, gnl|bosTau2|chr18 (37278177-37278529)
               

               
               261-624, gnl|Hg17|chr19 (38976446-38976775)
               

               
               261-624, gnl|Mm7|chr7 (31545138-31544594)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ova (0.129132)
               

               
               thg (0.126791)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ova (0.129132)
               

               
               thg (0.126791)

	261-624, gnl\|bosTau2\|chr18 (37278177-37278529)
	261-624, gnl\|Hg17\|chr19 (38976446-38976775)
	261-624, gnl\|Mm7\|chr7 (31545138-31544594)