Non-Coding RNA Search

Ss1.1-rova003_g18.5

Sequence:


               
               CAGGACCTCTGGTAATGTATTTTTAAAATTATTATTGAAGTATAGTTGATGTGCAATGGG
ATAGTTTCTGATTCAGTTGTATGTATATATACATACTCTTTTTCAAATCTTTTCTGTTGT
GGTTTATTACAG------------------------------------------------
------------------------------------------------TATCCCTCCCCC
ACCCCCTTCCCCTTTGGTAACCATAAGTTTGTTCTCTGTGAGTCTGTTTCTGTTTTATAA
ATAAGTTCATTTGTGTCATACTTTAGATTCCACATATAAGTGATAACA------------
------------------------TTGTATGATAATCCCTACATGCAATCAACTATAATG
GTTAAAATAAAAATCATGAAATTAAAAAAAATAAAAATAAAAGCTATGGAATTCTAAAAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGGACCTCTGGTAATGTATTTTTAAAATTATTATTGAAGTATAGTTGATGTGCAATGGG
ATAGTTTCTGATTCAGTTGTATGTATATATACATACTCTTTTTCAAATCTTTTCTGTTGT
GGTTTATTACAG------------------------------------------------
------------------------------------------------TATCCCTCCCCC
ACCCCCTTCCCCTTTGGTAACCATAAGTTTGTTCTCTGTGAGTCTGTTTCTGTTTTATAA
ATAAGTTCATTTGTGTCATACTTTAGATTCCACATATAAGTGATAACA------------
------------------------TTGTATGATAATCCCTACATGCAATCAACTATAATG
GTTAAAATAAAAATCATGAAATTAAAAAAAATAAAAATAAAAGCTATGGAATTCTAAAAA
AAAAAAAAAAAA

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               134-253, gnl|bosTau2|chr11 (3833391-3833512)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               134-253, gnl|bosTau2|chr11 (3833391-3833512)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ova (0.129132)
               

               
               nbm (0.0993246)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ova (0.129132)
               

               
               nbm (0.0993246)