Ss1.1-rova006_d2.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTCCATGTATTTAGCTTCCAAACTGGTGGAGACAATGTATTTCAAAGGCATTGAAGCAG GAAAGGTTCCCTATTTTCCCCATGCAGACACTATCATCTATTCCATCTCTACAGCAATTT GCTTCCAGGCAGCTGTCATGGAAGTTCAGAACTTGCGACCGTCTTACTGGAAGTTTCTTT TAAGGCTCACCAAGGGCAAGTTTAATGTCATGAACCGAAAAGTCCTTGATGTTTTTGGTA CTGGTGCCTCTAAACACTTTCAGGACTTCATCCCTAGGTTGGACCCAAGATATACAACTG TAACGCCAGAATTGCCCATCGAGTTTTCTTGAAGATGGCTAATTTAATAATGTGACTTCA TGTTTCATTATTTTGTCCTGGAGAGTTAAATATGTTGAACACAAAGAATGGGGCCTGAGC TTGAACTTCAGTGTTATTTCAATGAAAGATCCTCTTTTTGTGTTTGTTTTTCTTACCAAT CAGAAATCCAGAAGCTTTTTAGGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTCCATGTATTTAGCTTCCAAACTGGTGGAGACAATGTATTTCAAAGGCATTGAAGCAG GAAAGGTTCCCTATTTTCCCCATGCAGACACTATCATCTATTCCATCTCTACAGCAATTT GCTTCCAGGCAGCTGTCATGGAAGTTCAGAACTTGCGACCGTCTTACTGGAAGTTTCTTT TAAGGCTCACCAAGGGCAAGTTTAATGTCATGAACCGAAAAGTCCTTGATGTTTTTGGTA CTGGTGCCTCTAAACACTTTCAGGACTTCATCCCTAGGTTGGACCCAAGATATACAACTG TAACGCCAGAATTGCCCATCGAGTTTTCTTGAAGATGGCTAATTTAATAATGTGACTTCA TGTTTCATTATTTTGTCCTGGAGAGTTAAATATGTTGAACACAAAGAATGGGGCCTGAGC TTGAACTTCAGTGTTATTTCAATGAAAGATCCTCTTTTTGTGTTTGTTTTTCTTACCAAT CAGAAATCCAGAAGCTTTTTAGGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 28-132, gnl|bosTau2|chr29 (3416408-3416304) | |
| 28-132, gnl|canFam2|chr21 (15413493-15413365) | |
| 28-132, gnl|danRer3|chr10 (19055808-19055931) | |
| 28-132, gnl|dasNov1|scaffold_7878 (481-358) | |
| 28-132, gnl|echTel1|scaffold_282130 (53959-53836) | |
| 28-132, gnl|fr1|chrUn (200123000-200123119) | |
| 28-132, gnl|galGal2|chr1 (180225201-180225077) | |
| 28-132, gnl|hg17|chr11 (86706814-86706937) | |
| 28-132, gnl|Hg17|chr11 (86706822-86706926) | |
| 28-132, gnl|loxAfr1|scaffold_204 (217419-217540) | |
| 28-132, gnl|mm7|chr7 (85081834-85081711) | |
| 28-132, gnl|Mm7|chr7 (85081824-85081720) | |
| 28-132, gnl|monDom2|scaffold_46 (83946-83824) | |
| 28-132, gnl|oryCun1|scaffold_202427 (7772-7896) | |
| 28-132, gnl|panTro1|chr9 (88532949-88533072) | |
| 28-132, gnl|rheMac2|chr14 (85602894-85603017) | |
| 28-132, gnl|rn3|chr1 (145747767-145747644) | |
| 28-132, gnl|tetNig1|chr7 (3522839-3522720) | |
| 28-132, gnl|xenTro1|scaffold_195 (917322-917193) | |
| 197-502, gnl|bosTau2|chr29 (3413404-3413098) | |
| 197-502, gnl|Hg17|chr11 (86709888-86710190) | |
| 197-502, gnl|Mm7|chr7 (85079037-85078746) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 28-132, gnl|bosTau2|chr29 (3416408-3416304) | |
| 28-132, gnl|canFam2|chr21 (15413493-15413365) | |
| 28-132, gnl|danRer3|chr10 (19055808-19055931) | |
| 28-132, gnl|dasNov1|scaffold_7878 (481-358) | |
| 28-132, gnl|echTel1|scaffold_282130 (53959-53836) | |
| 28-132, gnl|fr1|chrUn (200123000-200123119) | |
| 28-132, gnl|galGal2|chr1 (180225201-180225077) | |
| 28-132, gnl|hg17|chr11 (86706814-86706937) | |
| 28-132, gnl|Hg17|chr11 (86706822-86706926) | |
| 28-132, gnl|loxAfr1|scaffold_204 (217419-217540) | |
| 28-132, gnl|mm7|chr7 (85081834-85081711) | |
| 28-132, gnl|Mm7|chr7 (85081824-85081720) | |
| 28-132, gnl|monDom2|scaffold_46 (83946-83824) | |
| 28-132, gnl|oryCun1|scaffold_202427 (7772-7896) | |
| 28-132, gnl|panTro1|chr9 (88532949-88533072) | |
| 28-132, gnl|rheMac2|chr14 (85602894-85603017) | |
| 28-132, gnl|rn3|chr1 (145747767-145747644) | |
| 28-132, gnl|tetNig1|chr7 (3522839-3522720) | |
| 28-132, gnl|xenTro1|scaffold_195 (917322-917193) | |
| 197-502, gnl|bosTau2|chr29 (3413404-3413098) | |
| 197-502, gnl|Hg17|chr11 (86709888-86710190) | |
| 197-502, gnl|Mm7|chr7 (85079037-85078746) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ova (0.129132) | |
| thg (0.126791) |