Non-Coding RNA Search

Ss1.1-rova010_c4.5S

Sequence:


               
               CTTATTCTGAAATTTAGTCTCAAACTGGAATGCCTTTGAGGACAGATGTTTCTGTAGAGG
TCCAGCGTTTATATTAAGTTTTATTTCAGTGTCTATTCCGAATCCTAGTCATAGCCCATA
AGAAGGAATGTGACTTTCATACTGGACTTCGCTGATGTGCTTCAGTGTGCACTAGTCTTT
CTTTTCTTTAGATCATAGCCATATGGTAAATTTTCTATTTTGTTATGGTTCCTTTTTATT
GACGGGCATGCAGTGGGTGTTTCTTGGAAATGGCCAATTTTTATTAAAATCTTTCTGGAG
GAAAATTTAATCTGGCAATATAGACTAATAGTCGTTTTGCATAGTATGTTGTTGAATGTT
GTGTGTGAAGTGGGTGAAGGTTTTGTTTATACATGTGAAGCAAGCCTTTGTGTGATAGAT
AACTTGTCATTACTAATTGAAGGGCAGTGAGGTTGTCAAATTTAACTTGTTTTTAACAGT
ATTCATCTTCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTATTCTGAAATTTAGTCTCAAACTGGAATGCCTTTGAGGACAGATGTTTCTGTAGAGG
TCCAGCGTTTATATTAAGTTTTATTTCAGTGTCTATTCCGAATCCTAGTCATAGCCCATA
AGAAGGAATGTGACTTTCATACTGGACTTCGCTGATGTGCTTCAGTGTGCACTAGTCTTT
CTTTTCTTTAGATCATAGCCATATGGTAAATTTTCTATTTTGTTATGGTTCCTTTTTATT
GACGGGCATGCAGTGGGTGTTTCTTGGAAATGGCCAATTTTTATTAAAATCTTTCTGGAG
GAAAATTTAATCTGGCAATATAGACTAATAGTCGTTTTGCATAGTATGTTGTTGAATGTT
GTGTGTGAAGTGGGTGAAGGTTTTGTTTATACATGTGAAGCAAGCCTTTGTGTGATAGAT
AACTTGTCATTACTAATTGAAGGGCAGTGAGGTTGTCAAATTTAACTTGTTTTTAACAGT
ATTCATCTTCAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-310, gnl|bosTau2|chr5 (17536474-17536804)
               

               
               1-310, gnl|Hg17|chr5 (151164792-151165108)
               

               
               1-310, gnl|Mm7|chr11 (55457335-55457642)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-310, gnl|bosTau2|chr5 (17536474-17536804)
               

               
               1-310, gnl|Hg17|chr5 (151164792-151165108)
               

               
               1-310, gnl|Mm7|chr11 (55457335-55457642)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ova (0.129132)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ova (0.129132)

	1-310, gnl\|bosTau2\|chr5 (17536474-17536804)
	1-310, gnl\|Hg17\|chr5 (151164792-151165108)
	1-310, gnl\|Mm7\|chr11 (55457335-55457642)