Ss1.1-rova012_i18.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCCAGGCACGCCTGAGATGAGAGGGAACATCATGGACACCAGTGTAGAGCAGGACCTGAT CCGAGAACTGAGTCAGAAAAAACAGAACCTGTTGCTGGAGCTCCGTAACTACGAGGACAA TGCCAAGGCCGAACTGAGCAGTCCCCTGAGTGAGGCTGATGGGCATCGGGGCGTCATCCC GGCCAACACCAAGCTGCACACGGCCCTCTCCGTCAACCTGGGGAGTGCAGCGCAGGCTGC CCACACCGAGTTGTGCATCTCCACTTCTAACGACACCATCATCCGAGCAGTACTGATTTT TGCAGAGGGAATTTTTCTAGGTGAAAGCCACGTGGTGCATCCCAGCATTCACAACCTTTC CAGCTCCATTCGCATCCCAATCACACCTCCCAAAGATGTCCCTGTGGATCTGCACTTGAA AACCTTCGTGGGTTACAGAAGCAGCACCCAGTTTCACGTATTTGAGCTGACAAGACAGCT CCCCCGCTTCTCCATGTATGCACTGACCAGCCCAGACTCAGCCAGTGAGCCGCCTAGTTA TGTCAACTTCATCATCGCAGAACGGGCGCAGAGGGTTGTTATGTGGCTCAACCAGAACTT TCTGTTACCAGAGGACACAAACATTCAGAATGCTCCATTTCAAGTGTGTTTCACATCCTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCCAGGCACGCCTGAGATGAGAGGGAACATCATGGACACCAGTGTAGAGCAGGACCTGAT CCGAGAACTGAGTCAGAAAAAACAGAACCTGTTGCTGGAGCTCCGTAACTACGAGGACAA TGCCAAGGCCGAACTGAGCAGTCCCCTGAGTGAGGCTGATGGGCATCGGGGCGTCATCCC GGCCAACACCAAGCTGCACACGGCCCTCTCCGTCAACCTGGGGAGTGCAGCGCAGGCTGC CCACACCGAGTTGTGCATCTCCACTTCTAACGACACCATCATCCGAGCAGTACTGATTTT TGCAGAGGGAATTTTTCTAGGTGAAAGCCACGTGGTGCATCCCAGCATTCACAACCTTTC CAGCTCCATTCGCATCCCAATCACACCTCCCAAAGATGTCCCTGTGGATCTGCACTTGAA AACCTTCGTGGGTTACAGAAGCAGCACCCAGTTTCACGTATTTGAGCTGACAAGACAGCT CCCCCGCTTCTCCATGTATGCACTGACCAGCCCAGACTCAGCCAGTGAGCCGCCTAGTTA TGTCAACTTCATCATCGCAGAACGGGCGCAGAGGGTTGTTATGTGGCTCAACCAGAACTT TCTGTTACCAGAGGACACAAACATTCAGAATGCTCCATTTCAAGTGTGTTTCACATCCTT |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 126-270, gnl|bosTau2|chr18 (23973561-23973417) | |
| 126-270, gnl|canFam2|chr2 (62573731-62573595) | |
| 126-270, gnl|danRer3|chr18 (18699907-18700031) | |
| 126-270, gnl|dasNov1|scaffold_203742 (3202-3066) | |
| 126-270, gnl|galGal2|chr11 (2034027-2033911) | |
| 126-270, gnl|hg17|chr16 (55092740-55092876) | |
| 126-270, gnl|Hg17|chr16 (55092912-55092768) | |
| 126-270, gnl|loxAfr1|scaffold_13282 (58523-58387) | |
| 126-270, gnl|mm7|chr8 (92670043-92670179) | |
| 126-270, gnl|Mm7|chr8 (92670215-92670071) | |
| 126-270, gnl|monDom2|scaffold_35 (23127307-23127443) | |
| 126-270, gnl|oryCun1|scaffold_198557 (58749-58617) | |
| 126-270, gnl|panTro1|chr18 (49190648-49190784) | |
| 126-270, gnl|rheMac2|chr20 (54811845-54811981) | |
| 126-270, gnl|rn3|chr19 (11373908-11373768) | |
| 126-270, gnl|tetNig1|chrUn_random (139879730-139879611) | |
| 126-270, gnl|xenTro1|scaffold_180 (212780-212659) | |
| 272-444, gnl|bosTau2|chr18 (23973324-23973152) | |
| 272-444, gnl|canFam2|chr2 (62573992-62573750) | |
| 272-444, gnl|danRer3|chr18 (18697528-18697745) | |
| 272-444, gnl|dasNov1|scaffold_203742 (3463-3222) | |
| 272-444, gnl|galGal2|chr11 (2034975-2034773) | |
| 272-444, gnl|hg17|chr16 (55092239-55092491) | |
| 272-444, gnl|Hg17|chr16 (55092439-55092267) | |
| 272-444, gnl|loxAfr1|scaffold_13282 (58784-58556) | |
| 272-444, gnl|mm7|chr8 (92669787-92670018) | |
| 272-444, gnl|Mm7|chr8 (92669984-92669812) | |
| 272-444, gnl|monDom2|scaffold_35 (23127044-23127297) | |
| 272-444, gnl|oryCun1|scaffold_198557 (59009-58768) | |
| 272-444, gnl|panTro1|chr18 (49190146-49190398) | |
| 272-444, gnl|rheMac2|chr20 (54811587-54811818) | |
| 272-444, gnl|rn3|chr19 (11374168-11373952) | |
| 272-444, gnl|tetNig1|chrUn_random (139879962-139879756) | |
| 272-444, gnl|xenTro1|scaffold_180 (213839-213646) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 126-270, gnl|bosTau2|chr18 (23973561-23973417) | |
| 126-270, gnl|canFam2|chr2 (62573731-62573595) | |
| 126-270, gnl|danRer3|chr18 (18699907-18700031) | |
| 126-270, gnl|dasNov1|scaffold_203742 (3202-3066) | |
| 126-270, gnl|galGal2|chr11 (2034027-2033911) | |
| 126-270, gnl|hg17|chr16 (55092740-55092876) | |
| 126-270, gnl|Hg17|chr16 (55092912-55092768) | |
| 126-270, gnl|loxAfr1|scaffold_13282 (58523-58387) | |
| 126-270, gnl|mm7|chr8 (92670043-92670179) | |
| 126-270, gnl|Mm7|chr8 (92670215-92670071) | |
| 126-270, gnl|monDom2|scaffold_35 (23127307-23127443) | |
| 126-270, gnl|oryCun1|scaffold_198557 (58749-58617) | |
| 126-270, gnl|panTro1|chr18 (49190648-49190784) | |
| 126-270, gnl|rheMac2|chr20 (54811845-54811981) | |
| 126-270, gnl|rn3|chr19 (11373908-11373768) | |
| 126-270, gnl|tetNig1|chrUn_random (139879730-139879611) | |
| 126-270, gnl|xenTro1|scaffold_180 (212780-212659) | |
| 272-444, gnl|bosTau2|chr18 (23973324-23973152) | |
| 272-444, gnl|canFam2|chr2 (62573992-62573750) | |
| 272-444, gnl|danRer3|chr18 (18697528-18697745) | |
| 272-444, gnl|dasNov1|scaffold_203742 (3463-3222) | |
| 272-444, gnl|galGal2|chr11 (2034975-2034773) | |
| 272-444, gnl|hg17|chr16 (55092239-55092491) | |
| 272-444, gnl|Hg17|chr16 (55092439-55092267) | |
| 272-444, gnl|loxAfr1|scaffold_13282 (58784-58556) | |
| 272-444, gnl|mm7|chr8 (92669787-92670018) | |
| 272-444, gnl|Mm7|chr8 (92669984-92669812) | |
| 272-444, gnl|monDom2|scaffold_35 (23127044-23127297) | |
| 272-444, gnl|oryCun1|scaffold_198557 (59009-58768) | |
| 272-444, gnl|panTro1|chr18 (49190146-49190398) | |
| 272-444, gnl|rheMac2|chr20 (54811587-54811818) | |
| 272-444, gnl|rn3|chr19 (11374168-11373952) | |
| 272-444, gnl|tetNig1|chrUn_random (139879962-139879756) | |
| 272-444, gnl|xenTro1|scaffold_180 (213839-213646) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cki (0.165235) | |
| ova (0.129132) |