Non-Coding RNA Search

Ss1.1-rova013_l2.5

Sequence:


               
               GGCATTGTACTTTTTCTTTTTCACTAAAATTTCTTCCTTCATTAAGGTGACTATCATTTC
TAAATACTTGGAAGCATCTCTGTAACTGAGCTTTGTGCTATGTTTTGAAAACTTCTACAC
ACTTGTTGTTTGTTGTTGGCATATTGTCATATGTCCATTGATAGACAGTCCAAAGTTCTG
TGGGAAATGTGGTTCAATTCTGTACTTTCCAGGATCTTGGCCTCTTTCTTCTCCAATGTA
GTGTGTTTCAAAATAAGAAAACAACTCTTGGGGCAAATCGTTGTCATCTGACAGCTTGAT
ACAGCCATTAATAATGTTACCAACTGGAAAAATGCTAATGCATTTCAGCCAGTTGAAACC
AAGTTGTCAAACCAAAAACTGTCCCTCAATTATTTTATCTTTCATGGGAATATGCCTTGC
AGCTGATTGGTTATTCGATGAAGATGTTTGCAGCAGGGGTGCTTGTGGCAAGGATGTCTA
TGGCAAAGATGCTTGTGGTGAAGGTATCTAGAACCCATTTCAAAATGTAATTAAGATATG
TTATCAATGAGATAATTTGTTTTTCATATTAAGTTTTTGAAATCTGTTGTGCATATTACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCATTGTACTTTTTCTTTTTCACTAAAATTTCTTCCTTCATTAAGGTGACTATCATTTC
TAAATACTTGGAAGCATCTCTGTAACTGAGCTTTGTGCTATGTTTTGAAAACTTCTACAC
ACTTGTTGTTTGTTGTTGGCATATTGTCATATGTCCATTGATAGACAGTCCAAAGTTCTG
TGGGAAATGTGGTTCAATTCTGTACTTTCCAGGATCTTGGCCTCTTTCTTCTCCAATGTA
GTGTGTTTCAAAATAAGAAAACAACTCTTGGGGCAAATCGTTGTCATCTGACAGCTTGAT
ACAGCCATTAATAATGTTACCAACTGGAAAAATGCTAATGCATTTCAGCCAGTTGAAACC
AAGTTGTCAAACCAAAAACTGTCCCTCAATTATTTTATCTTTCATGGGAATATGCCTTGC
AGCTGATTGGTTATTCGATGAAGATGTTTGCAGCAGGGGTGCTTGTGGCAAGGATGTCTA
TGGCAAAGATGCTTGTGGTGAAGGTATCTAGAACCCATTTCAAAATGTAATTAAGATATG
TTATCAATGAGATAATTTGTTTTTCATATTAAGTTTTTGAAATCTGTTGTGCATATTACA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               2-600, gnl|bosTau2|chr26 (8344554-8343958)
               


               
               3-293, gnl|bosTau2|chr27 (10917288-10917570)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-600, gnl|bosTau2|chr26 (8344554-8343958)
               


               
               3-293, gnl|bosTau2|chr27 (10917288-10917570)

Expressed library(ies): 6 entry(ies)

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Expressed library(ies): 6 entry(ies)

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               ova (0.387397)
               

               
               sto (0.179824)
               

               
               gul (0.177588)
               

               
               rec (0.17307)
               

               
               mga (0.160205)
               

               
               liv (0.146284)

Expressed library(ies): 6 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ova (0.387397)
               

               
               sto (0.179824)
               

               
               gul (0.177588)
               

               
               rec (0.17307)
               

               
               mga (0.160205)
               

               
               liv (0.146284)

	2-600, gnl\|bosTau2\|chr26 (8344554-8343958)

	3-293, gnl\|bosTau2\|chr27 (10917288-10917570)

	ova (0.387397)
	sto (0.179824)
	gul (0.177588)
	rec (0.17307)
	mga (0.160205)
	liv (0.146284)