Non-Coding RNA Search

Ss1.1-rova015_i4.5

Sequence:


               
               GTTCCCTCTGCGATGAGCTGTGCCCTGAGAGTAAGTCTGAGGAGCCTGTCTGTGCCAGTG
ACAATGCCACCTACGCCAGTGAGTGTGCCATGAAGGAAGCGGCCTGTTCCTCAGGTGTGC
TGCTGGAAGTAAAGCACTCTGGATCTTGCAACTGTAAGTGTGATTTCTAACCTTTCTGAA
ATTGAAAGCTTTCCCAGGCAGGCCCTAGGGAATGCGATGTAAAAAAGCACAAAAACCTCC
CCATATAAGCCCAGTTAGGTAGCTGCTAAGTTTTACCAGCAATTCAGCAATCCACAGAAA
AACTGCCTGGAATTTTTCTGGGCCCTTAGGACTTGTCCAACGATCATCAATGGGGTCGCC
TCTATAAACCTGTTTCCAGTCATTCACCCCTAATTTCTTTAGCTTTAGTAGTGTGCTTTG
CTTTATTAACACTTGAATCTAAACTAACTGCTTCAAAGGTGTTTTTTTTTCTTTTTCAAA
GACAGCTTTCTATTATCATACATGGGCTGCTGCTTTGCGCAGTTGCCTCTACTAACTCTG
AATTAAGAACCCAAAGCAGTTATACCTAGAACACGAGCGCTTTTTATCTAATTTCAGGAA
TCTGCCCGTAAAACCTGAGCCATTGATTCTTCAGAACTTTCTGCAGTTTTTGACTTCATA
GATAATGTTTTTAAAAAACATTTTTTTTAAACTTAATGCATAACAGCAGATGCCAAAAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTCCCTCTGCGATGAGCTGTGCCCTGAGAGTAAGTCTGAGGAGCCTGTCTGTGCCAGTG
ACAATGCCACCTACGCCAGTGAGTGTGCCATGAAGGAAGCGGCCTGTTCCTCAGGTGTGC
TGCTGGAAGTAAAGCACTCTGGATCTTGCAACTGTAAGTGTGATTTCTAACCTTTCTGAA
ATTGAAAGCTTTCCCAGGCAGGCCCTAGGGAATGCGATGTAAAAAAGCACAAAAACCTCC
CCATATAAGCCCAGTTAGGTAGCTGCTAAGTTTTACCAGCAATTCAGCAATCCACAGAAA
AACTGCCTGGAATTTTTCTGGGCCCTTAGGACTTGTCCAACGATCATCAATGGGGTCGCC
TCTATAAACCTGTTTCCAGTCATTCACCCCTAATTTCTTTAGCTTTAGTAGTGTGCTTTG
CTTTATTAACACTTGAATCTAAACTAACTGCTTCAAAGGTGTTTTTTTTTCTTTTTCAAA
GACAGCTTTCTATTATCATACATGGGCTGCTGCTTTGCGCAGTTGCCTCTACTAACTCTG
AATTAAGAACCCAAAGCAGTTATACCTAGAACACGAGCGCTTTTTATCTAATTTCAGGAA
TCTGCCCGTAAAACCTGAGCCATTGATTCTTCAGAACTTTCTGCAGTTTTTGACTTCATA
GATAATGTTTTTAAAAAACATTTTTTTTAAACTTAATGCATAACAGCAGATGCCAAAAAG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q7TS59_RAT

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q7TS59_RAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-719, gnl|bosTau2|chr20 (13862069-13862831)
               

               
               1-719, gnl|Hg17|chr5 (52816662-52817391)
               

               
               1-719, gnl|Mm7|chr13 (111626870-111626110)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-719, gnl|bosTau2|chr20 (13862069-13862831)
               

               
               1-719, gnl|Hg17|chr5 (52816662-52817391)
               

               
               1-719, gnl|Mm7|chr13 (111626870-111626110)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               ova (0.258264)
               

               
               fat (0.147427)
               

               
               nmm (0.132802)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ova (0.258264)
               

               
               fat (0.147427)
               

               
               nmm (0.132802)

	1-719, gnl\|bosTau2\|chr20 (13862069-13862831)
	1-719, gnl\|Hg17\|chr5 (52816662-52817391)
	1-719, gnl\|Mm7\|chr13 (111626870-111626110)