Non-Coding RNA Search

Ss1.1-rova015_l19.5

Sequence:


               
               TTTTTTAGACTAGGTTCTTAAAAAGTTACTTAATTTTCATTATTCTTCAGTTCTATCTGA
TCTCTCAAAGAGAGTCTGGGAAGTACTCTGAGTACTATCAGTTTGTCCTTGGATTAGGCC
AGATTTTCCCTGTACATAGCTGGCATTTTACTGGCCTCTGTAGAACTGATTTTTCTGGAT
AACACTTTGGCAATCCATACGAAAATCCCTATGAAATTTAATTGCTGTGGATACTGTAAA
GGGTGTTTATCATAATTCATAATGTTCTATTTAAGGATGCATGGGAGAAATTTTCTCTGA
ACTCAGTTATGCTTTTCCTGAATTGCTAATTGTTTTTTTTTCCTTAAAGATAGTAAATAT
TCAACTGATTCTATTTTTCTTTTCATATTGATGCCAAGACCACTTAGAGCCCAGTTTGTG
GCCCACCTCCACCTCCAGCAAACGCTTAGGACCTCCTGTTATGTTTTGTATGCTAGCCAC
ATTCTTGGTTCCATCTTCCTTTTCTACCTTTACTTATTCTCATTTTTCTGTTTTAGTCTT
TTTTATTTATCTTATTAGATTATCTTCATCTTTGTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTAGACTAGGTTCTTAAAAAGTTACTTAATTTTCATTATTCTTCAGTTCTATCTGA
TCTCTCAAAGAGAGTCTGGGAAGTACTCTGAGTACTATCAGTTTGTCCTTGGATTAGGCC
AGATTTTCCCTGTACATAGCTGGCATTTTACTGGCCTCTGTAGAACTGATTTTTCTGGAT
AACACTTTGGCAATCCATACGAAAATCCCTATGAAATTTAATTGCTGTGGATACTGTAAA
GGGTGTTTATCATAATTCATAATGTTCTATTTAAGGATGCATGGGAGAAATTTTCTCTGA
ACTCAGTTATGCTTTTCCTGAATTGCTAATTGTTTTTTTTTCCTTAAAGATAGTAAATAT
TCAACTGATTCTATTTTTCTTTTCATATTGATGCCAAGACCACTTAGAGCCCAGTTTGTG
GCCCACCTCCACCTCCAGCAAACGCTTAGGACCTCCTGTTATGTTTTGTATGCTAGCCAC
ATTCTTGGTTCCATCTTCCTTTTCTACCTTTACTTATTCTCATTTTTCTGTTTTAGTCTT
TTTTATTTATCTTATTAGATTATCTTCATCTTTGTA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               29-572, gnl|bosTau2|chr19 (13597478-13596944)
               

               
               29-572, gnl|Hg17|chr17 (23960048-23959164)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               29-572, gnl|bosTau2|chr19 (13597478-13596944)
               

               
               29-572, gnl|Hg17|chr17 (23960048-23959164)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               ova (0.129132)
               

               
               ret (0.128733)
               

               
               pgl (0.118483)
               

               
               spc (0.113366)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ova (0.129132)
               

               
               ret (0.128733)
               

               
               pgl (0.118483)
               

               
               spc (0.113366)

	29-572, gnl\|bosTau2\|chr19 (13597478-13596944)
	29-572, gnl\|Hg17\|chr17 (23960048-23959164)