Ss1.1-rova015_o18.5
|
ACATTCTGCGCATGCGCGGGCTGCTGCGCGGCTCGTCCAGGCCTTGGTCGTGTGAGGAAC
CGCGCACCGGGGTACCCGGTTGCCGCAGCAGTGTGGTCCGCAGTATCTTATCACTTACGG
GATGCTGTTTCTGGCGTTGGGCGGCCCGTGGGCTGCCGGATTGCGCCTCGGCGGGAAGAG
GACGGTGCCGTGGGCGGCCACCATGCTCCGAAGCCCCAGGGCGGCCGTCTCGCGGGCGGC
CTCCTGCAGCCGCTCCTCGGGGCTGTGGGGAGCCGCGTCGCTTCTGCCGTGTCGGGTGCG
AGCGCAGATACCTGTTTGTTGGGAAAGATGTGTTCGATGTTTACACACACAGCTTGAAAA
CCCAGAAGATGGAAGGCTGATTTATACTGGGAATCTGGCCCGAACAGTGTTTGGTGTGAA
GTGTTTCTCTTACTCTACCAGTGTGATCAGCCTTGTGTTTCTTCCATACATTTTTGCACA
AAATAATATGCTGTTTGGAAATCTGCCTTTGCAGATCTTATTTTATGGCATCATAGGAAG
CTTTACAGTGATCACTCCAGCACTGCTTCACTTTCTGACAAAAGGCTATGTCATTCGGTT
GTACCATGAGGCCACAACAGACACTTACAAAGCCATCACTTACAGTGTTGTCCTTTCAGA
AAAAAGTACAGTGTTTCACCAGAACGATGTGAAGGTTCCGAACAGCACACATGTGTTTAC
CACATTTTACGCTAAAACAAAATCACTGTTAGTTAATCCAGCGCTCTTTCCAAACCCTAA
AGACTATGACCATCTAATGGGCTATGACAAACCATTCACTTTTGATATGGAAGAAGACAG
TGAAAAGAAACAGCTTAAAGAAGACAAATGAATCTGTTGTTTTTGTGTATATACTCAGAT
GTTATTTATGTTCAATGTGTAATTACATTGCTTTTACTTTTGATTTCTGTTAGTGACTGT
TAAAAATAACTTGGGCATGCTCTTGTGGTGCAGTGGGCTCATGATCCGGTGATGTCAGTT
CAGCAACTCGGGTTTGATCCCTGGCCTGGGAGCTTCCACATGCCACAGGCACAGCCAGAA
ATAATAGTTTGGAACTTTATCAAACAACTTTTAATTTTCAAAGAATTATCTTCCTTTATA
ATAAAATATTTGAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ACATTCTGCGCATGCGCGGGCTGCTGCGCGGCTCGTCCAGGCCTTGGTCGTGTGAGGAAC
CGCGCACCGGGGTACCCGGTTGCCGCAGCAGTGTGGTCCGCAGTATCTTATCACTTACGG
GATGCTGTTTCTGGCGTTGGGCGGCCCGTGGGCTGCCGGATTGCGCCTCGGCGGGAAGAG
GACGGTGCCGTGGGCGGCCACCATGCTCCGAAGCCCCAGGGCGGCCGTCTCGCGGGCGGC
CTCCTGCAGCCGCTCCTCGGGGCTGTGGGGAGCCGCGTCGCTTCTGCCGTGTCGGGTGCG
AGCGCAGATACCTGTTTGTTGGGAAAGATGTGTTCGATGTTTACACACACAGCTTGAAAA
CCCAGAAGATGGAAGGCTGATTTATACTGGGAATCTGGCCCGAACAGTGTTTGGTGTGAA
GTGTTTCTCTTACTCTACCAGTGTGATCAGCCTTGTGTTTCTTCCATACATTTTTGCACA
AAATAATATGCTGTTTGGAAATCTGCCTTTGCAGATCTTATTTTATGGCATCATAGGAAG
CTTTACAGTGATCACTCCAGCACTGCTTCACTTTCTGACAAAAGGCTATGTCATTCGGTT
GTACCATGAGGCCACAACAGACACTTACAAAGCCATCACTTACAGTGTTGTCCTTTCAGA
AAAAAGTACAGTGTTTCACCAGAACGATGTGAAGGTTCCGAACAGCACACATGTGTTTAC
CACATTTTACGCTAAAACAAAATCACTGTTAGTTAATCCAGCGCTCTTTCCAAACCCTAA
AGACTATGACCATCTAATGGGCTATGACAAACCATTCACTTTTGATATGGAAGAAGACAG
TGAAAAGAAACAGCTTAAAGAAGACAAATGAATCTGTTGTTTTTGTGTATATACTCAGAT
GTTATTTATGTTCAATGTGTAATTACATTGCTTTTACTTTTGATTTCTGTTAGTGACTGT
TAAAAATAACTTGGGCATGCTCTTGTGGTGCAGTGGGCTCATGATCCGGTGATGTCAGTT
CAGCAACTCGGGTTTGATCCCTGGCCTGGGAGCTTCCACATGCCACAGGCACAGCCAGAA
ATAATAGTTTGGAACTTTATCAAACAACTTTTAATTTTCAAAGAATTATCTTCCTTTATA
ATAAAATATTTGAAAAAAAAAAAA
|
|
gi|7020704|dbj|BAA91240.1| |
Protein identifier
|
gi|7020704|dbj|BAA91240.1| |
|
24-273, gnl|bosTau2|chr14 (20734692-20734444) |
|
24-273, gnl|canFam2|chr29 (25479283-25479577) |
|
24-273, gnl|dasNov1|scaffold_16929 (10314-10018) |
|
24-273, gnl|hg17|chr8 (75050881-75051217) |
|
24-273, gnl|Hg17|chr8 (75050983-75051229) |
|
24-273, gnl|loxAfr1|scaffold_102571 (316-8) |
|
24-273, gnl|mm7|chr1 (16854367-16854680) |
|
24-273, gnl|Mm7|chr1 (16854440-16854683) |
|
24-273, gnl|panTro1|chr7 (77090750-77091051) |
|
24-273, gnl|rheMac2|chr8 (76468145-76468446) |
|
24-273, gnl|rn3|chr5 (1983121-1983429) |
| |
|
410-882, gnl|bosTau2|chr14 (20727523-20727051) |
|
410-882, gnl|Hg17|chr8 (75055940-75056414) |
|
410-882, gnl|Mm7|chr1 (16866193-16866665) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
24-273, gnl|bosTau2|chr14 (20734692-20734444) |
|
24-273, gnl|canFam2|chr29 (25479283-25479577) |
|
24-273, gnl|dasNov1|scaffold_16929 (10314-10018) |
|
24-273, gnl|hg17|chr8 (75050881-75051217) |
|
24-273, gnl|Hg17|chr8 (75050983-75051229) |
|
24-273, gnl|loxAfr1|scaffold_102571 (316-8) |
|
24-273, gnl|mm7|chr1 (16854367-16854680) |
|
24-273, gnl|Mm7|chr1 (16854440-16854683) |
|
24-273, gnl|panTro1|chr7 (77090750-77091051) |
|
24-273, gnl|rheMac2|chr8 (76468145-76468446) |
|
24-273, gnl|rn3|chr5 (1983121-1983429) |
| |
|
410-882, gnl|bosTau2|chr14 (20727523-20727051) |
|
410-882, gnl|Hg17|chr8 (75055940-75056414) |
|
410-882, gnl|Mm7|chr1 (16866193-16866665) |
|
isp (0.601504) |
|
ret (0.514933) |
|
ski (0.440205) |
|
lin (0.436808) |
|
aor (0.390549) |
|
thg (0.380373) |
|
gul (0.355177) |
|
vin (0.332557) |
|
tbr (0.308356) |
|
cte (0.29274) |
|
kid (0.259471) |
|
tes (0.207814) |
|
hea (0.204499) |
|
ill (0.175593) |
|
ton (0.1755) |
|
sin (0.174948) |
|
cje (0.165235) |
|
csp (0.161186) |
|
cag (0.151194) |
|
lun (0.150489) |
|
bfe (0.149858) |
|
fat (0.147427) |
|
liv (0.146284) |
|
ssp (0.13552) |
|
ste (0.135208) |
|
pla (0.133672) |
|
lyg (0.133103) |
|
ova (0.129132) |
|
bla (0.124347) |
|
med (0.116252) |
|
jca (0.11396) |
|
isp (0.601504) |
|
ret (0.514933) |
|
ski (0.440205) |
|
lin (0.436808) |
|
aor (0.390549) |
|
thg (0.380373) |
|
gul (0.355177) |
|
vin (0.332557) |
|
tbr (0.308356) |
|
cte (0.29274) |
|
kid (0.259471) |
|
tes (0.207814) |
|
hea (0.204499) |
|
ill (0.175593) |
|
ton (0.1755) |
|
sin (0.174948) |
|
cje (0.165235) |
|
csp (0.161186) |
|
cag (0.151194) |
|
lun (0.150489) |
|
bfe (0.149858) |
|
fat (0.147427) |
|
liv (0.146284) |
|
ssp (0.13552) |
|
ste (0.135208) |
|
pla (0.133672) |
|
lyg (0.133103) |
|
ova (0.129132) |
|
bla (0.124347) |
|
med (0.116252) |
|
jca (0.11396) |
