Non-Coding RNA Search

Ss1.1-rova018_m15.5

Sequence:


               
               GCTCTGACCCCGGGAGGAAAGCCACGTGCGCGATGCGGATACGTGGATGTGTCTTTAAGA
AAGGCCTGGCTATGAACAAATCGTGGTTAGAACAGTTGCCTATATCTCTCTGCGATAGCT
GTTTGAATTTTTATTATAATGGTTCAAATGGAAGAAATAAAACTAACAAGTATAAGGCCG
TAGCAGCTGCGTCATCTCCATGTACTTTGAAATATCAGCCCTGATTGTTGTCTCCAATGG
GAAAGTATAATTCTTAACTATGACAGAAGACTCTCTTCTCTGCGTCATTGTTTGGCTTTT
TTCTCTATCTATAACTGAAAACATGTACATCTGGATTTCTGAGCAACCTTGCTGTAAAAA
TCTGACTCAAGATAAAGAATAAAATCTCACTGTACAATTCTGACTCTATTAAACTGTACA
GATGATCAATTCTTCTGAGACCTCCAATTCATTAAGAAAGGATCTAAGTTTGACAACTCA
TCAAAATAGATGAGGAAGAAAAGAAAAATAAAATAAATGTCCCTTCATTCAAAAGAGTGG
AGAGAAAGAGGGCATTAAATCATGAGTGTAAAAACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTCTGACCCCGGGAGGAAAGCCACGTGCGCGATGCGGATACGTGGATGTGTCTTTAAGA
AAGGCCTGGCTATGAACAAATCGTGGTTAGAACAGTTGCCTATATCTCTCTGCGATAGCT
GTTTGAATTTTTATTATAATGGTTCAAATGGAAGAAATAAAACTAACAAGTATAAGGCCG
TAGCAGCTGCGTCATCTCCATGTACTTTGAAATATCAGCCCTGATTGTTGTCTCCAATGG
GAAAGTATAATTCTTAACTATGACAGAAGACTCTCTTCTCTGCGTCATTGTTTGGCTTTT
TTCTCTATCTATAACTGAAAACATGTACATCTGGATTTCTGAGCAACCTTGCTGTAAAAA
TCTGACTCAAGATAAAGAATAAAATCTCACTGTACAATTCTGACTCTATTAAACTGTACA
GATGATCAATTCTTCTGAGACCTCCAATTCATTAAGAAAGGATCTAAGTTTGACAACTCA
TCAAAATAGATGAGGAAGAAAAGAAAAATAAAATAAATGTCCCTTCATTCAAAAGAGTGG
AGAGAAAGAGGGCATTAAATCATGAGTGTAAAAACC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               60-572, gnl|bosTau2|chr9 (39694523-39694029)
               

               
               60-572, gnl|Hg17|chr6 (131609205-131608662)
               

               
               60-572, gnl|Mm7|chr10 (24957697-24958342)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               60-572, gnl|bosTau2|chr9 (39694523-39694029)
               

               
               60-572, gnl|Hg17|chr6 (131609205-131608662)
               

               
               60-572, gnl|Mm7|chr10 (24957697-24958342)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ova (0.258264)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ova (0.258264)

	60-572, gnl\|bosTau2\|chr9 (39694523-39694029)
	60-572, gnl\|Hg17\|chr6 (131609205-131608662)
	60-572, gnl\|Mm7\|chr10 (24957697-24958342)