Ss1.1-rova026_j8.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTCTTTAAGAATGATCAGTGGAATTGGGATAACATAAGAGAGACGGCAGCTCCTGTGGT ACCTGAGCTCAGCAGTGACATAGACAGCAGCAATTTTGACGACATTGAGGATGATAAAGG AGATGTGGAAACCTTCCCAATTCCTAAAGCTTTCGTGGGAAATCAGCTGCCCTTTATAGG GTTTACCTATTATAGAGAAAATCTGTTATTAAGTGACTCTCCATCTTGCTTGAAATTTGA TCAAACTTTATAATTATAGTTTCTTATTTTCTGACAGATTCAGAAAAAGCTATACACATT AGAAGAACACCTTAGCACTGAGATACAAGCCAAAGAGGAACTAGAGCAGAAGTGCAAGTC TGTTAATACTCGCCTGGAGAAAGTAGCAAAGGAGCTAGAAGAAGAGATTGCCTTAAGGAA AAATGTGGAATCAGCATTAAGACAATTAGAAAGAGAAAAGGCACTTCTTCAGCACAAAAA TGCAGAATATCAGCGGAAGGCTGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTCTTTAAGAATGATCAGTGGAATTGGGATAACATAAGAGAGACGGCAGCTCCTGTGGT ACCTGAGCTCAGCAGTGACATAGACAGCAGCAATTTTGACGACATTGAGGATGATAAAGG AGATGTGGAAACCTTCCCAATTCCTAAAGCTTTCGTGGGAAATCAGCTGCCCTTTATAGG GTTTACCTATTATAGAGAAAATCTGTTATTAAGTGACTCTCCATCTTGCTTGAAATTTGA TCAAACTTTATAATTATAGTTTCTTATTTTCTGACAGATTCAGAAAAAGCTATACACATT AGAAGAACACCTTAGCACTGAGATACAAGCCAAAGAGGAACTAGAGCAGAAGTGCAAGTC TGTTAATACTCGCCTGGAGAAAGTAGCAAAGGAGCTAGAAGAAGAGATTGCCTTAAGGAA AAATGTGGAATCAGCATTAAGACAATTAGAAAGAGAAAAGGCACTTCTTCAGCACAAAAA TGCAGAATATCAGCGGAAGGCTGA |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 47-206, gnl|bosTau2|chr11 (65341089-65341248) | |
| 47-206, gnl|Hg17|chr2 (11312079-11311920) | |
| 47-206, gnl|Mm7|chr12 (17007848-17008007) | |
| 254-364, gnl|bosTau2|chr11 (65347533-65347643) | |
| 254-364, gnl|canFam2|chr17 (10941315-10941427) | |
| 254-364, gnl|danRer3|chr20 (42293073-42293151) | |
| 254-364, gnl|dasNov1|scaffold_44396 (38818-38701) | |
| 254-364, gnl|echTel1|scaffold_305491 (286-398) | |
| 254-364, gnl|fr1|chrUn (263030524-263030618) | |
| 254-364, gnl|galGal2|chr3 (95452125-95452223) | |
| 254-364, gnl|hg17|chr2 (11307784-11307896) | |
| 254-364, gnl|Hg17|chr2 (11307917-11307807) | |
| 254-364, gnl|loxAfr1|scaffold_65614 (6338-6450) | |
| 254-364, gnl|mm7|chr12 (17011917-17011810) | |
| 254-364, gnl|Mm7|chr12 (17011787-17011897) | |
| 254-364, gnl|monDom2|scaffold_1 (97021731-97021619) | |
| 254-364, gnl|oryCun1|scaffold_194601 (147448-147533) | |
| 254-364, gnl|panTro1|chr12 (12024832-12024944) | |
| 254-364, gnl|rheMac2|chr13 (11297381-11297490) | |
| 254-364, gnl|rn3|chr6 (40649736-40649641) | |
| 254-364, gnl|tetNig1|chr10 (1203274-1203190) | |
| 254-364, gnl|xenTro1|scaffold_1042 (158453-158542) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 47-206, gnl|bosTau2|chr11 (65341089-65341248) | |
| 47-206, gnl|Hg17|chr2 (11312079-11311920) | |
| 47-206, gnl|Mm7|chr12 (17007848-17008007) | |
| 254-364, gnl|bosTau2|chr11 (65347533-65347643) | |
| 254-364, gnl|canFam2|chr17 (10941315-10941427) | |
| 254-364, gnl|danRer3|chr20 (42293073-42293151) | |
| 254-364, gnl|dasNov1|scaffold_44396 (38818-38701) | |
| 254-364, gnl|echTel1|scaffold_305491 (286-398) | |
| 254-364, gnl|fr1|chrUn (263030524-263030618) | |
| 254-364, gnl|galGal2|chr3 (95452125-95452223) | |
| 254-364, gnl|hg17|chr2 (11307784-11307896) | |
| 254-364, gnl|Hg17|chr2 (11307917-11307807) | |
| 254-364, gnl|loxAfr1|scaffold_65614 (6338-6450) | |
| 254-364, gnl|mm7|chr12 (17011917-17011810) | |
| 254-364, gnl|Mm7|chr12 (17011787-17011897) | |
| 254-364, gnl|monDom2|scaffold_1 (97021731-97021619) | |
| 254-364, gnl|oryCun1|scaffold_194601 (147448-147533) | |
| 254-364, gnl|panTro1|chr12 (12024832-12024944) | |
| 254-364, gnl|rheMac2|chr13 (11297381-11297490) | |
| 254-364, gnl|rn3|chr6 (40649736-40649641) | |
| 254-364, gnl|tetNig1|chr10 (1203274-1203190) | |
| 254-364, gnl|xenTro1|scaffold_1042 (158453-158542) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| isp (0.150376) | |
| ova (0.129132) |