Ss1.1-rova026_l3.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCCAAAATCATTCTTGTCATAGGTGGTCCAGGAAGTGGAAAGGGTACCCAAAGTTTGAAA ATTGCAGAGCGTTATGGATTTCAGTACATTTCGGTGGGAGAACTATTAAGGAAGAAGATC CACAGTACCAGCAGCAATAGGAAATGGAGTCTTATTGCCAAAATAATTACAACTGGAGAA TTGGCCCCACAGGAAACAACGATTACAGAGATAAAACAAAAACTGATGCAAATGCCTGAC GAAGTGGGCATTGTTATTGACGGGTTTCCAAGAGATGTTGCCCAGGCTCTGTCTTTTGAG GACCAAATCTGTACTCCCGACTTGGTGGTGTTCCTGGCTTGTGCCAATCAGAGGCTCAAA GAAAGATTACAGAAGCGTGCAGAGCAGCAGGGGCGGCCGGATGACAATCTGAAAGCTACC CAGAGGAGGCTAATGAACTTCAAGCAGAACGCGGCTCCATTGGTTAAATACTTCCAGGAA AAGGGACTCATCATGACGTTCGATGCCGACCGGGACGAGGATGAGGTGTTCTATGACATC AGCATGGCGGTTGACAGCAAGTTATTCCCCAACAAAGAAGCTGCAGCAGGTTCAAGTGAC CTTGACCCTTCGATAATGTTGGACGCTGGAGAGATCATTGACACAGGATCTGATTATGAA GACCAGGTAATTAAAAATTTCTAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCCAAAATCATTCTTGTCATAGGTGGTCCAGGAAGTGGAAAGGGTACCCAAAGTTTGAAA ATTGCAGAGCGTTATGGATTTCAGTACATTTCGGTGGGAGAACTATTAAGGAAGAAGATC CACAGTACCAGCAGCAATAGGAAATGGAGTCTTATTGCCAAAATAATTACAACTGGAGAA TTGGCCCCACAGGAAACAACGATTACAGAGATAAAACAAAAACTGATGCAAATGCCTGAC GAAGTGGGCATTGTTATTGACGGGTTTCCAAGAGATGTTGCCCAGGCTCTGTCTTTTGAG GACCAAATCTGTACTCCCGACTTGGTGGTGTTCCTGGCTTGTGCCAATCAGAGGCTCAAA GAAAGATTACAGAAGCGTGCAGAGCAGCAGGGGCGGCCGGATGACAATCTGAAAGCTACC CAGAGGAGGCTAATGAACTTCAAGCAGAACGCGGCTCCATTGGTTAAATACTTCCAGGAA AAGGGACTCATCATGACGTTCGATGCCGACCGGGACGAGGATGAGGTGTTCTATGACATC AGCATGGCGGTTGACAGCAAGTTATTCCCCAACAAAGAAGCTGCAGCAGGTTCAAGTGAC CTTGACCCTTCGATAATGTTGGACGCTGGAGAGATCATTGACACAGGATCTGATTATGAA GACCAGGTAATTAAAAATTTCTAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 21-193, gnl|bosTau2|chr3 (48397730-48397902) | |
| 21-193, gnl|canFam2|chr6 (72569209-72569031) | |
| 21-193, gnl|danRer3|chr2 (3486025-3485848) | |
| 21-193, gnl|dasNov1|scaffold_769 (27115-27293) | |
| 21-193, gnl|echTel1|scaffold_324238 (66537-66689) | |
| 21-193, gnl|fr1|chrUn (248984370-248984190) | |
| 21-193, gnl|galGal2|chr8 (19453086-19452908) | |
| 21-193, gnl|hg17|chr1 (77475264-77475442) | |
| 21-193, gnl|Hg17|chr1 (77475263-77475435) | |
| 21-193, gnl|loxAfr1|scaffold_20732 (4301-4479) | |
| 21-193, gnl|mm7|chr3 (152554952-152554774) | |
| 21-193, gnl|Mm7|chr3 (152554951-152554779) | |
| 21-193, gnl|oryCun1|scaffold_206118 (20092-20227) | |
| 21-193, gnl|panTro1|chr1 (76045260-76045438) | |
| 21-193, gnl|rheMac2|chr1 (80125450-80125628) | |
| 21-193, gnl|tetNig1|chrUn_random (17163121-17163298) | |
| 21-193, gnl|xenTro1|scaffold_558 (38569-38747) | |
| 303-497, gnl|bosTau2|chr3 (48435302-48435496) | |
| 303-497, gnl|canFam2|chr6 (72534109-72533954) | |
| 303-497, gnl|danRer3|chr5 (69741031-69741185) | |
| 303-497, gnl|dasNov1|scaffold_769 (75371-75523) | |
| 303-497, gnl|echTel1|scaffold_321406 (39529-39372) | |
| 303-497, gnl|fr1|chrUn (248976156-248975996) | |
| 303-497, gnl|galGal2|chr8 (19440911-19440757) | |
| 303-497, gnl|hg17|chr1 (77518068-77518222) | |
| 303-497, gnl|Hg17|chr1 (77518077-77518273) | |
| 303-497, gnl|loxAfr1|scaffold_2305 (99020-99175) | |
| 303-497, gnl|mm7|chr3 (152517269-152517117) | |
| 303-497, gnl|Mm7|chr3 (152517257-152517064) | |
| 303-497, gnl|panTro1|chr1 (76088106-76088260) | |
| 303-497, gnl|rheMac2|chr1 (80170453-80170607) | |
| 303-497, gnl|rn3|chr2_random (4291282-4291130) | |
| 303-497, gnl|tetNig1|chrUn_random (17167652-17167792) | |
| 303-497, gnl|xenTro1|scaffold_558 (55283-55432) | |
| 498-610, gnl|bosTau2|chr3 (48508997-48509107) | |
| 498-610, gnl|Hg17|chr1 (77588686-77588796) | |
| 498-610, gnl|Mm7|chr3 (152434651-152434541) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 21-193, gnl|bosTau2|chr3 (48397730-48397902) | |
| 21-193, gnl|canFam2|chr6 (72569209-72569031) | |
| 21-193, gnl|danRer3|chr2 (3486025-3485848) | |
| 21-193, gnl|dasNov1|scaffold_769 (27115-27293) | |
| 21-193, gnl|echTel1|scaffold_324238 (66537-66689) | |
| 21-193, gnl|fr1|chrUn (248984370-248984190) | |
| 21-193, gnl|galGal2|chr8 (19453086-19452908) | |
| 21-193, gnl|hg17|chr1 (77475264-77475442) | |
| 21-193, gnl|Hg17|chr1 (77475263-77475435) | |
| 21-193, gnl|loxAfr1|scaffold_20732 (4301-4479) | |
| 21-193, gnl|mm7|chr3 (152554952-152554774) | |
| 21-193, gnl|Mm7|chr3 (152554951-152554779) | |
| 21-193, gnl|oryCun1|scaffold_206118 (20092-20227) | |
| 21-193, gnl|panTro1|chr1 (76045260-76045438) | |
| 21-193, gnl|rheMac2|chr1 (80125450-80125628) | |
| 21-193, gnl|tetNig1|chrUn_random (17163121-17163298) | |
| 21-193, gnl|xenTro1|scaffold_558 (38569-38747) | |
| 303-497, gnl|bosTau2|chr3 (48435302-48435496) | |
| 303-497, gnl|canFam2|chr6 (72534109-72533954) | |
| 303-497, gnl|danRer3|chr5 (69741031-69741185) | |
| 303-497, gnl|dasNov1|scaffold_769 (75371-75523) | |
| 303-497, gnl|echTel1|scaffold_321406 (39529-39372) | |
| 303-497, gnl|fr1|chrUn (248976156-248975996) | |
| 303-497, gnl|galGal2|chr8 (19440911-19440757) | |
| 303-497, gnl|hg17|chr1 (77518068-77518222) | |
| 303-497, gnl|Hg17|chr1 (77518077-77518273) | |
| 303-497, gnl|loxAfr1|scaffold_2305 (99020-99175) | |
| 303-497, gnl|mm7|chr3 (152517269-152517117) | |
| 303-497, gnl|Mm7|chr3 (152517257-152517064) | |
| 303-497, gnl|panTro1|chr1 (76088106-76088260) | |
| 303-497, gnl|rheMac2|chr1 (80170453-80170607) | |
| 303-497, gnl|rn3|chr2_random (4291282-4291130) | |
| 303-497, gnl|tetNig1|chrUn_random (17167652-17167792) | |
| 303-497, gnl|xenTro1|scaffold_558 (55283-55432) | |
| 498-610, gnl|bosTau2|chr3 (48508997-48509107) | |
| 498-610, gnl|Hg17|chr1 (77588686-77588796) | |
| 498-610, gnl|Mm7|chr3 (152434651-152434541) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ova (0.129132) | |
| eep (0.122564) |