Non-Coding RNA Search

Ss1.1-rova034_c23.5

Sequence:


               
               CTTCTGCCTGTGGGGGTTGGGGGAATGCAGCCAACAACAAAACAAACGCTTTGCAACCTT
TAATTCCAGATCACCATATTACCCTTTTCATTGTTTATTTCAAAAAAGAACAGTTAGATG
TGATGTTTGGCATGTGTAAAATTGGTTTACATTGGGGTCATTAATCTTATGTTCTGTCAC
ATTGTAGCTGTGGGTAGAAAAGTGAAAATTAGAACTGACCTATTTGTTAGGACCGTTACA
TTAGAGTTAATGACTGATGTACAAGGAGAGATGTGATCTTGTTTTATTTTAGTCCAGAAG
GTAGACTTTTTCCATACAGCTCCTTTTTCAATACAGCTTCCTCTTTGCAGAGCGCTTTTC
TGTTTAAAGTGTGAAATGCTGAAGTTCTGCATTGAAGGTGAAAGCACATGAATCAAGGAG
ATGGCAGTGCTCTCTGGCAGACTTCATTTGCAGAAATTATACCTGTTATATATGTGTCAT
AAGGTGATATATTTTCATCTAAAGAATAAATGCATCCACTGTGGAAAAAAAAAAAAAAAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTCTGCCTGTGGGGGTTGGGGGAATGCAGCCAACAACAAAACAAACGCTTTGCAACCTT
TAATTCCAGATCACCATATTACCCTTTTCATTGTTTATTTCAAAAAAGAACAGTTAGATG
TGATGTTTGGCATGTGTAAAATTGGTTTACATTGGGGTCATTAATCTTATGTTCTGTCAC
ATTGTAGCTGTGGGTAGAAAAGTGAAAATTAGAACTGACCTATTTGTTAGGACCGTTACA
TTAGAGTTAATGACTGATGTACAAGGAGAGATGTGATCTTGTTTTATTTTAGTCCAGAAG
GTAGACTTTTTCCATACAGCTCCTTTTTCAATACAGCTTCCTCTTTGCAGAGCGCTTTTC
TGTTTAAAGTGTGAAATGCTGAAGTTCTGCATTGAAGGTGAAAGCACATGAATCAAGGAG
ATGGCAGTGCTCTCTGGCAGACTTCATTTGCAGAAATTATACCTGTTATATATGTGTCAT
AAGGTGATATATTTTCATCTAAAGAATAAATGCATCCACTGTGGAAAAAAAAAAAAAAAA
AAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               51-527, gnl|bosTau2|chr26 (28032659-28033140)
               

               
               51-527, gnl|Hg17|chr10 (124647959-124648468)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               51-527, gnl|bosTau2|chr26 (28032659-28033140)
               

               
               51-527, gnl|Hg17|chr10 (124647959-124648468)

Expressed library(ies): 7 entry(ies)

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Expressed library(ies): 7 entry(ies)

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               cbe (0.239234)
               

               
               hea (0.204499)
               

               
               aor (0.195274)
               

               
               isp (0.150376)
               

               
               ova (0.129132)
               

               
               ebs (0.118301)
               

               
               spc (0.113366)

Expressed library(ies): 7 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbe (0.239234)
               

               
               hea (0.204499)
               

               
               aor (0.195274)
               

               
               isp (0.150376)
               

               
               ova (0.129132)
               

               
               ebs (0.118301)
               

               
               spc (0.113366)

	51-527, gnl\|bosTau2\|chr26 (28032659-28033140)
	51-527, gnl\|Hg17\|chr10 (124647959-124648468)

	cbe (0.239234)
	hea (0.204499)
	aor (0.195274)
	isp (0.150376)
	ova (0.129132)
	ebs (0.118301)
	spc (0.113366)