Non-Coding RNA Search

Ss1.1-rova037_i20.5

Sequence:


               
               CCAACCCATAGGGAATCCAAGCCAACCGTACTTCACTTTGGGAAGCAGTCTGACATGTAA
GCATGCAGAGATGTGATTCAGACACAATCACTCACTCCCCGGTGAGAGACTTTTTCTCAG
TATGTTTTTCTTGGTCTAGCTACCAACCAGGGAGCCAGCTCCCTAAGCCCAGAGAAGGCT
CATTCCGCATACAGATCACTTGGAGTTGATGGTGTAGGTCGATGCTATTTTTTAGCTCTT
CAGAAGTAACCCATTCTTACTCTTGTCATTATCAGTTGGACCTCCATGCTACACATTTCT
AAGAATTAAATGCCTAGATGGATTAAATGTAGTGTGTGAATGTTCTACGTAACACCCAAT
AGAGTTTAACAAGTGACTTGAATGATTTTTCCTAAATTGTTTGCAACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCAACCCATAGGGAATCCAAGCCAACCGTACTTCACTTTGGGAAGCAGTCTGACATGTAA
GCATGCAGAGATGTGATTCAGACACAATCACTCACTCCCCGGTGAGAGACTTTTTCTCAG
TATGTTTTTCTTGGTCTAGCTACCAACCAGGGAGCCAGCTCCCTAAGCCCAGAGAAGGCT
CATTCCGCATACAGATCACTTGGAGTTGATGGTGTAGGTCGATGCTATTTTTTAGCTCTT
CAGAAGTAACCCATTCTTACTCTTGTCATTATCAGTTGGACCTCCATGCTACACATTTCT
AAGAATTAAATGCCTAGATGGATTAAATGTAGTGTGTGAATGTTCTACGTAACACCCAAT
AGAGTTTAACAAGTGACTTGAATGATTTTTCCTAAATTGTTTGCAACT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               3-408, gnl|bosTau2|chr6 (28881068-28880670)
               

               
               3-408, gnl|Hg17|chr4 (37273062-37273453)
               

               
               3-408, gnl|Mm7|chr5 (63163806-63164207)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-408, gnl|bosTau2|chr6 (28881068-28880670)
               

               
               3-408, gnl|Hg17|chr4 (37273062-37273453)
               

               
               3-408, gnl|Mm7|chr5 (63163806-63164207)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ova (0.129132)
               

               
               ecc (0.115035)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ova (0.129132)
               

               
               ecc (0.115035)

	3-408, gnl\|bosTau2\|chr6 (28881068-28880670)
	3-408, gnl\|Hg17\|chr4 (37273062-37273453)
	3-408, gnl\|Mm7\|chr5 (63163806-63164207)