Non-Coding RNA Search

Ss1.1-rova040_o16.5

Sequence:


               
               GCTGAATAACGGTCTCCCCAGATGTCACAGCCTAATCCCTGGAATGTGTGAATGCTACCT
TGGTAGTGAAAGGCCCTTTGCAGAAGTGAACAGATGTGTAGATTAAGGCTCTTGATGAAG
GACTTTGAGATCAAGAGATTAGTCTGGTTTATCAGGGTTAGCCCTAAATGTCATCACAAG
TATCCTTATAAGAGGGAGGCAAAGGGAGATCTGACCACAGGAGATGTAATGACAGAAGAA
GCTGGCGTGAGGTTAGAAAGGGCCGCGAGCCAAAAAACAAAGTTAGGAAAAGCAACAAAA
TGGTTTCTCCCCTGAAGCCTCCGGAAGGAATGCAGCCCTTGCAATAGACTTCTGACTTCC
AGGACTATAAGAAACTAAATTTGTGTTGTTTCAAACCACTAGGTTTGTGATAATTTGTTT
CAGCAGGAACAGGAAACTAATTCGGGGACTCTGACTACAGTGAGACCATGCCACCAGTCA
AGTGGCACCTGTCCCAAATAACTCCTTGATGGCAGAAAATGGCTGCAGTGACCAAAGGAA
TAGGCTAGGGCTCCATCTACCTGGGTAACTGAGGAATCTTCAGTCAGTAAAAGCTTCAGG
AGATGCTTCAGCATCTGAACCTGACTTGTTCCCTCCTAACATTTCTGTTGGCTGAGCAGT
TTCCTGACCTGTTGGGAGAAACTGTTATATTTGAAGTCTGTGGCAGTTAGTTTCAAAGAA
GATTTCTAAAGAGTGCTCATAAAGATGAGGCCCTGGTACCAAGAAGGTAATGATTGGATA
ATGGCCTAGGGGAGCCCTTGGAGATGGTGAGACTATCTTTGGCTCCCAGAAAGGATCGTC
TTTATTTATCCTCAAACCAGTCTAATTTGGGAACCAACACCAAACATGCTGAGAGACTTC
AGGACAAGAATGGAGAATAGTCCTGGATATACTTTAACTCTCTCTTTATGTGTGTGTAAA
TATGTATGTGTGTATTTATAAACATATAATTTAGTATATATATGTGTGTGTGTATATATA
TAAAATCTAATAGACCCCAAAAATCATTTTAACATGCTGTAATATAAAAATTATTAGTGA
GATACATTAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTGAATAACGGTCTCCCCAGATGTCACAGCCTAATCCCTGGAATGTGTGAATGCTACCT
TGGTAGTGAAAGGCCCTTTGCAGAAGTGAACAGATGTGTAGATTAAGGCTCTTGATGAAG
GACTTTGAGATCAAGAGATTAGTCTGGTTTATCAGGGTTAGCCCTAAATGTCATCACAAG
TATCCTTATAAGAGGGAGGCAAAGGGAGATCTGACCACAGGAGATGTAATGACAGAAGAA
GCTGGCGTGAGGTTAGAAAGGGCCGCGAGCCAAAAAACAAAGTTAGGAAAAGCAACAAAA
TGGTTTCTCCCCTGAAGCCTCCGGAAGGAATGCAGCCCTTGCAATAGACTTCTGACTTCC
AGGACTATAAGAAACTAAATTTGTGTTGTTTCAAACCACTAGGTTTGTGATAATTTGTTT
CAGCAGGAACAGGAAACTAATTCGGGGACTCTGACTACAGTGAGACCATGCCACCAGTCA
AGTGGCACCTGTCCCAAATAACTCCTTGATGGCAGAAAATGGCTGCAGTGACCAAAGGAA
TAGGCTAGGGCTCCATCTACCTGGGTAACTGAGGAATCTTCAGTCAGTAAAAGCTTCAGG
AGATGCTTCAGCATCTGAACCTGACTTGTTCCCTCCTAACATTTCTGTTGGCTGAGCAGT
TTCCTGACCTGTTGGGAGAAACTGTTATATTTGAAGTCTGTGGCAGTTAGTTTCAAAGAA
GATTTCTAAAGAGTGCTCATAAAGATGAGGCCCTGGTACCAAGAAGGTAATGATTGGATA
ATGGCCTAGGGGAGCCCTTGGAGATGGTGAGACTATCTTTGGCTCCCAGAAAGGATCGTC
TTTATTTATCCTCAAACCAGTCTAATTTGGGAACCAACACCAAACATGCTGAGAGACTTC
AGGACAAGAATGGAGAATAGTCCTGGATATACTTTAACTCTCTCTTTATGTGTGTGTAAA
TATGTATGTGTGTATTTATAAACATATAATTTAGTATATATATGTGTGTGTGTATATATA
TAAAATCTAATAGACCCCAAAAATCATTTTAACATGCTGTAATATAAAAATTATTAGTGA
GATACATTAAAAAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               1-937, gnl|bosTau2|chr5 (21571132-21572086)
               

               
               1-937, gnl|Mm7|chr15 (99453414-99452276)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-937, gnl|bosTau2|chr5 (21571132-21572086)
               

               
               1-937, gnl|Mm7|chr15 (99453414-99452276)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               spl (0.143184)
               

               
               ova (0.129132)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)
               

               
               ova (0.129132)

	1-937, gnl\|bosTau2\|chr5 (21571132-21572086)
	1-937, gnl\|Mm7\|chr15 (99453414-99452276)