Non-Coding RNA Search

Ss1.1-rpan003_b10.5

Sequence:


               
               AGCAGCCACATGAGGCTAGGGTTCCCTTTCCTGGGTGGGGCAAGTCTAGAAGGGGATTCT
GCCAGATGTGTATTCCTCCCATGGCCTAATTTGAGTTGTAGATTAGATTAACAGGTAGAC
CTTCTTTGAGGCTTCAGTGTAAGGGATGGGGACAGGAATCTGAGATTTGGGTGAACTACG
TGTGCATGAATAAACTGAACTCTTTTCTGTGTCCTGTGCAGGCTGGAGATATGGAGTTAC
TATAACACTGTCTGGAAGAGTAGCCTCGGGTCAAATCAAAGTTGCTTTGTTTGGAGATAA
GGGAAACACTCGCCAATACAATATCTTCACGTAAATTCCCCTTTTTTGTAGCACTTCTTA
CTAGATGATGTGCACGGCCTTCACATCCATGCACTGAAAAGGCTTGTTGTCACTTTATCA
ATGGATTTTAAAATATTTACTTTATGTATTGAAGTTAATTTCAGACTTCTGCTAATAAAT
GTTCTTTTCTCTGTTATAAATCCAGGCATTACGTCTTTCCCAATAGATCAGACTTCTCAA
AAGTAAATCTACTATTATCCCAGATATCATGTTCTCTGATTAGCCTAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCAGCCACATGAGGCTAGGGTTCCCTTTCCTGGGTGGGGCAAGTCTAGAAGGGGATTCT
GCCAGATGTGTATTCCTCCCATGGCCTAATTTGAGTTGTAGATTAGATTAACAGGTAGAC
CTTCTTTGAGGCTTCAGTGTAAGGGATGGGGACAGGAATCTGAGATTTGGGTGAACTACG
TGTGCATGAATAAACTGAACTCTTTTCTGTGTCCTGTGCAGGCTGGAGATATGGAGTTAC
TATAACACTGTCTGGAAGAGTAGCCTCGGGTCAAATCAAAGTTGCTTTGTTTGGAGATAA
GGGAAACACTCGCCAATACAATATCTTCACGTAAATTCCCCTTTTTTGTAGCACTTCTTA
CTAGATGATGTGCACGGCCTTCACATCCATGCACTGAAAAGGCTTGTTGTCACTTTATCA
ATGGATTTTAAAATATTTACTTTATGTATTGAAGTTAATTTCAGACTTCTGCTAATAAAT
GTTCTTTTCTCTGTTATAAATCCAGGCATTACGTCTTTCCCAATAGATCAGACTTCTCAA
AAGTAAATCTACTATTATCCCAGATATCATGTTCTCTGATTAGCCTAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               52-588, gnl|bosTau2|chr26 (23839511-23840053)
               

               
               52-588, gnl|Hg17|chr10 (118353035-118354569)
               

               
               52-588, gnl|Mm7|chr19 (58662513-58662962)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               52-588, gnl|bosTau2|chr26 (23839511-23840053)
               

               
               52-588, gnl|Hg17|chr10 (118353035-118354569)
               

               
               52-588, gnl|Mm7|chr19 (58662513-58662962)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pan (2.12364)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pan (2.12364)

	52-588, gnl\|bosTau2\|chr26 (23839511-23840053)
	52-588, gnl\|Hg17\|chr10 (118353035-118354569)
	52-588, gnl\|Mm7\|chr19 (58662513-58662962)