Non-Coding RNA Search

Ss1.1-rpan007_g13.5

Sequence:


               
               CGGAACTCCGCATTGTTTATCCTTTAAGGATATTACTCTTTGTTTTAATAGAAACTAGAT
CTCTCAAAATAAATGGTAATTTTCTAGAAGCTGAAAAAAATCATCTCACCTTTTCAGCTG
TTATCTTTGTTCCTCTTAGGAGTTTTCTATCTTGATTCATCTCTTCATGGAAAGAAATCT
CCTACATAATTTTCCACTTAAAAAAAAAAAAACACTAAATTTAAACAGCTATACATGGAA
TGAGTATAGTAATTCCTACACAAATTCAGTAAGTGTAAGCTTCATTTCCTTCTCTTTATA
GCGTCCAGTTTTAGCAATGTTTAAGACTGAGCTCTGTTTGCTTCCATCTCTTTGTCCCCC
AGCCGTTTGATACCCTAGTCAGTACTTAATATGCTCTTTAATCACATGTCTGCAAGAGAA
CAGGATCTGGGTGCTGTGATTCAGAGCATGTGGTGTTCAAGGAGTTGGCACCACAGTGAC
GTGAAGAAGTTTCCAGTTGCTTACCTGATGTTGTCTAGCCTTCTGCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGAACTCCGCATTGTTTATCCTTTAAGGATATTACTCTTTGTTTTAATAGAAACTAGAT
CTCTCAAAATAAATGGTAATTTTCTAGAAGCTGAAAAAAATCATCTCACCTTTTCAGCTG
TTATCTTTGTTCCTCTTAGGAGTTTTCTATCTTGATTCATCTCTTCATGGAAAGAAATCT
CCTACATAATTTTCCACTTAAAAAAAAAAAAACACTAAATTTAAACAGCTATACATGGAA
TGAGTATAGTAATTCCTACACAAATTCAGTAAGTGTAAGCTTCATTTCCTTCTCTTTATA
GCGTCCAGTTTTAGCAATGTTTAAGACTGAGCTCTGTTTGCTTCCATCTCTTTGTCCCCC
AGCCGTTTGATACCCTAGTCAGTACTTAATATGCTCTTTAATCACATGTCTGCAAGAGAA
CAGGATCTGGGTGCTGTGATTCAGAGCATGTGGTGTTCAAGGAGTTGGCACCACAGTGAC
GTGAAGAAGTTTCCAGTTGCTTACCTGATGTTGTCTAGCCTTCTGCAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               12-528, gnl|bosTau2|chr13 (25718892-25718395)
               

               
               12-528, gnl|Hg17|chr20 (21315929-21316457)
               

               
               12-528, gnl|Mm7|chr2 (146816154-146816662)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               12-528, gnl|bosTau2|chr13 (25718892-25718395)
               

               
               12-528, gnl|Hg17|chr20 (21315929-21316457)
               

               
               12-528, gnl|Mm7|chr2 (146816154-146816662)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               pan (0.23596)
               

               
               nep (0.183925)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pan (0.23596)
               

               
               nep (0.183925)

	12-528, gnl\|bosTau2\|chr13 (25718892-25718395)
	12-528, gnl\|Hg17\|chr20 (21315929-21316457)
	12-528, gnl\|Mm7\|chr2 (146816154-146816662)