Ss1.1-rpan007_i24.5
Sequence: | Distiller database | More info |
Sequence: | Distiller database | Help | Less info |
CACCTTGACTTCTTCCCAAATGGAGGAGAAGAAATGCCTGGATGCAAGAAGAATGCCCTG TCGCAGATCGTGGACCTAGACGGCATCTGGTCAGGAACCCGGGACTTTGTGGCTTGCAAT CACCTGAGAAGCTACAAGTATTACTCAGAGAGCATCCTCAATCCCGATGGGTTCGCTGCA TACCCCTGCGCTTCCTACAGGGCCTTTGAGTCTAACAAGTGCTTCCCCTGTCCAGATGAA GGATGCCCACAGATGGGTCACTATGCCGATAGATTTGCTGGCAAGACACATGAGGAGCAG CAGAAATTCTTCCTGAACACAGGAGATTCCGAAGATTTTGCTCGCTGGAGATATGGAGTT ACTATAACACTGTCTGGAAGAGTAGCCTCGGGTCAAATCAAAGTTGCTTTGTTTGGAGAT AAGGGAAACACTCGCCAATACAATATCTTCACTGGGATTATCACACCCGGGTCCACTCAT TCCAATGAGTTTGACGCAGATCTCGATGTTGGAACAATTGAGAAAGTCAAGTTTCTTTGG AATAACAACGTGCTAAACCCAACTCTCCCCAGAGTGGGTGCAGCCAAAATCACTGTGCAG AAGGGAGAAGATAAGACGGAGTACAATTTCTGTAGCGAACAGACTGTGAGAGAAGGCGTT CTGCTCACTCTCACACCCTGTTAAACTCCAGGCACGATGTGGCCGCCCTGTTAACACCAA TAAAATCCGTTGATGCATCAAAAAAAAAAAAAAAAA |
Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
CACCTTGACTTCTTCCCAAATGGAGGAGAAGAAATGCCTGGATGCAAGAAGAATGCCCTG TCGCAGATCGTGGACCTAGACGGCATCTGGTCAGGAACCCGGGACTTTGTGGCTTGCAAT CACCTGAGAAGCTACAAGTATTACTCAGAGAGCATCCTCAATCCCGATGGGTTCGCTGCA TACCCCTGCGCTTCCTACAGGGCCTTTGAGTCTAACAAGTGCTTCCCCTGTCCAGATGAA GGATGCCCACAGATGGGTCACTATGCCGATAGATTTGCTGGCAAGACACATGAGGAGCAG CAGAAATTCTTCCTGAACACAGGAGATTCCGAAGATTTTGCTCGCTGGAGATATGGAGTT ACTATAACACTGTCTGGAAGAGTAGCCTCGGGTCAAATCAAAGTTGCTTTGTTTGGAGAT AAGGGAAACACTCGCCAATACAATATCTTCACTGGGATTATCACACCCGGGTCCACTCAT TCCAATGAGTTTGACGCAGATCTCGATGTTGGAACAATTGAGAAAGTCAAGTTTCTTTGG AATAACAACGTGCTAAACCCAACTCTCCCCAGAGTGGGTGCAGCCAAAATCACTGTGCAG AAGGGAGAAGATAAGACGGAGTACAATTTCTGTAGCGAACAGACTGTGAGAGAAGGCGTT CTGCTCACTCTCACACCCTGTTAAACTCCAGGCACGATGTGGCCGCCCTGTTAACACCAA TAAAATCCGTTGATGCATCAAAAAAAAAAAAAAAAA |
Coded protein: 1 entry(ies) | More info |
Aligned organism(s): 46 entry(ies) | More info |
Aligned organism(s): 46 entry(ies) | Help | Less info |
92-213, gnl|bosTau2|chr26 (23836061-23836182) | |
92-213, gnl|Hg17|chr10 (118349546-118349667) | |
92-213, gnl|Mm7|chr19 (58659206-58659327) | |
214-344, gnl|bosTau2|chr26 (23837362-23837492) | |
214-344, gnl|canFam2|chr28 (30177806-30177969) | |
214-344, gnl|dasNov1|scaffold_13491 (11727-11888) | |
214-344, gnl|echTel1|scaffold_289540 (38755-38922) | |
214-344, gnl|fr1|chrUn (311749983-311749827) | |
214-344, gnl|hg17|chr10 (118350557-118350718) | |
214-344, gnl|Hg17|chr10 (118350574-118350704) | |
214-344, gnl|loxAfr1|scaffold_198 (131236-131079) | |
214-344, gnl|mm7|chr19 (58660348-58660501) | |
214-344, gnl|Mm7|chr19 (58660364-58660494) | |
214-344, gnl|monDom2|scaffold_14 (44781561-44781400) | |
214-344, gnl|oryCun1|scaffold_214643 (104546-104705) | |
214-344, gnl|panTro1|chr8 (120543272-120543433) | |
214-344, gnl|rheMac2|chr9 (116230646-116230807) | |
214-344, gnl|rn3|chr1 (265458395-265458548) | |
214-344, gnl|xenTro1|scaffold_1821 (45736-45905) | |
454-597, gnl|bosTau2|chr26 (23818672-23818815) | |
454-597, gnl|canFam2|chr28 (30155947-30156151) | |
454-597, gnl|dasNov1|scaffold_13491 (43823-43996) | |
454-597, gnl|echTel1|scaffold_280873 (8002-8204) | |
454-597, gnl|hg17|chr10 (118310946-118311150) | |
454-597, gnl|Hg17|chr10 (118310975-118311118) | |
454-597, gnl|loxAfr1|scaffold_198 (157038-156836) | |
454-597, gnl|mm7|chr19 (58602930-58603132) | |
454-597, gnl|Mm7|chr19 (58602959-58603102) | |
454-597, gnl|monDom2|scaffold_14 (44817965-44817760) | |
454-597, gnl|oryCun1|scaffold_214643 (49636-49835) | |
454-597, gnl|panTro1|chr8 (120503142-120503346) | |
454-597, gnl|rheMac2|chr9 (116189989-116190193) | |
454-597, gnl|rn3|chr1 (265328927-265329131) | |
622-739, gnl|bosTau2|chr26 (23845592-23845707) | |
622-739, gnl|canFam2|chr28 (30184017-30184205) | |
622-739, gnl|dasNov1|scaffold_13491 (46784-46973) | |
622-739, gnl|echTel1|scaffold_289540 (45210-45399) | |
622-739, gnl|hg17|chr10 (118358536-118358721) | |
622-739, gnl|Hg17|chr10 (118358556-118358673) | |
622-739, gnl|loxAfr1|scaffold_198 (123890-123683) | |
622-739, gnl|mm7|chr19 (58666244-58666430) | |
622-739, gnl|Mm7|chr19 (58666266-58666382) | |
622-739, gnl|monDom2|scaffold_14 (44775728-44775542) | |
622-739, gnl|oryCun1|scaffold_214643 (109396-109581) | |
622-739, gnl|rheMac2|chr9 (116239298-116239492) | |
622-739, gnl|rn3|chr1 (265464320-265464506) |
Aligned organism(s): 46 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
92-213, gnl|bosTau2|chr26 (23836061-23836182) | |
92-213, gnl|Hg17|chr10 (118349546-118349667) | |
92-213, gnl|Mm7|chr19 (58659206-58659327) | |
214-344, gnl|bosTau2|chr26 (23837362-23837492) | |
214-344, gnl|canFam2|chr28 (30177806-30177969) | |
214-344, gnl|dasNov1|scaffold_13491 (11727-11888) | |
214-344, gnl|echTel1|scaffold_289540 (38755-38922) | |
214-344, gnl|fr1|chrUn (311749983-311749827) | |
214-344, gnl|hg17|chr10 (118350557-118350718) | |
214-344, gnl|Hg17|chr10 (118350574-118350704) | |
214-344, gnl|loxAfr1|scaffold_198 (131236-131079) | |
214-344, gnl|mm7|chr19 (58660348-58660501) | |
214-344, gnl|Mm7|chr19 (58660364-58660494) | |
214-344, gnl|monDom2|scaffold_14 (44781561-44781400) | |
214-344, gnl|oryCun1|scaffold_214643 (104546-104705) | |
214-344, gnl|panTro1|chr8 (120543272-120543433) | |
214-344, gnl|rheMac2|chr9 (116230646-116230807) | |
214-344, gnl|rn3|chr1 (265458395-265458548) | |
214-344, gnl|xenTro1|scaffold_1821 (45736-45905) | |
454-597, gnl|bosTau2|chr26 (23818672-23818815) | |
454-597, gnl|canFam2|chr28 (30155947-30156151) | |
454-597, gnl|dasNov1|scaffold_13491 (43823-43996) | |
454-597, gnl|echTel1|scaffold_280873 (8002-8204) | |
454-597, gnl|hg17|chr10 (118310946-118311150) | |
454-597, gnl|Hg17|chr10 (118310975-118311118) | |
454-597, gnl|loxAfr1|scaffold_198 (157038-156836) | |
454-597, gnl|mm7|chr19 (58602930-58603132) | |
454-597, gnl|Mm7|chr19 (58602959-58603102) | |
454-597, gnl|monDom2|scaffold_14 (44817965-44817760) | |
454-597, gnl|oryCun1|scaffold_214643 (49636-49835) | |
454-597, gnl|panTro1|chr8 (120503142-120503346) | |
454-597, gnl|rheMac2|chr9 (116189989-116190193) | |
454-597, gnl|rn3|chr1 (265328927-265329131) | |
622-739, gnl|bosTau2|chr26 (23845592-23845707) | |
622-739, gnl|canFam2|chr28 (30184017-30184205) | |
622-739, gnl|dasNov1|scaffold_13491 (46784-46973) | |
622-739, gnl|echTel1|scaffold_289540 (45210-45399) | |
622-739, gnl|hg17|chr10 (118358536-118358721) | |
622-739, gnl|Hg17|chr10 (118358556-118358673) | |
622-739, gnl|loxAfr1|scaffold_198 (123890-123683) | |
622-739, gnl|mm7|chr19 (58666244-58666430) | |
622-739, gnl|Mm7|chr19 (58666266-58666382) | |
622-739, gnl|monDom2|scaffold_14 (44775728-44775542) | |
622-739, gnl|oryCun1|scaffold_214643 (109396-109581) | |
622-739, gnl|rheMac2|chr9 (116239298-116239492) | |
622-739, gnl|rn3|chr1 (265464320-265464506) |
Expressed library(ies): 2 entry(ies) | More info |
Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
pan (9.67437) | |
cte (0.29274) |