Ss1.1-rpan007_n7.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCAGGATGAAATTCCTCGTGTTGGCTGTTCTGCTCACAGTGGGCGCTGCCCAGGAAGGCA TCAGCTCAAGGGCATTATGGCAGTTTCGTAGCATGATTAAGTGCGCAATCCCCGGCAGTC ACCCCTTGATGGATTTCAACAACTATGGCTGCTACTGTGGCCTAGGTGGATCAGGGACCC CTGTGGATGAACTGGACAGGTGCTGCGAGACACACGACAACTGCTACAGAGATGCCAAGA ACCTGGACAGCTGTAAATTCCTCGTGGACAATCCCTACACCGAAAGCTACTCCTACTCAT GTTCTAACACTGAGATCACCTGCAACAGCAAAAACAATGCTTGTGAGGCCTTCATCTGTA ACTGTGACCGAAATGCTGCCATTTGCTTCTCAAAGGCCCCATACAACAAGGAGCACAAGA ACCTGGACACCAAGAAGTACTGTTAGAGCTAAGTATCACCCCTCGAAAATGTCATCCCTA TCTGCTTTATAGCCTTCACCCGTACACTGTGCCCTCCAATAAACACCTTATTGAAAAGCC AAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCAGGATGAAATTCCTCGTGTTGGCTGTTCTGCTCACAGTGGGCGCTGCCCAGGAAGGCA TCAGCTCAAGGGCATTATGGCAGTTTCGTAGCATGATTAAGTGCGCAATCCCCGGCAGTC ACCCCTTGATGGATTTCAACAACTATGGCTGCTACTGTGGCCTAGGTGGATCAGGGACCC CTGTGGATGAACTGGACAGGTGCTGCGAGACACACGACAACTGCTACAGAGATGCCAAGA ACCTGGACAGCTGTAAATTCCTCGTGGACAATCCCTACACCGAAAGCTACTCCTACTCAT GTTCTAACACTGAGATCACCTGCAACAGCAAAAACAATGCTTGTGAGGCCTTCATCTGTA ACTGTGACCGAAATGCTGCCATTTGCTTCTCAAAGGCCCCATACAACAAGGAGCACAAGA ACCTGGACACCAAGAAGTACTGTTAGAGCTAAGTATCACCCCTCGAAAATGTCATCCCTA TCTGCTTTATAGCCTTCACCCGTACACTGTGCCCTCCAATAAACACCTTATTGAAAAGCC AAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 26-202, gnl|bosTau2|chr2 (70404219-70404394) | |
| 26-202, gnl|canFam2|chr26 (19278998-19279151) | |
| 26-202, gnl|danRer3|chrUn (141970299-141970165) | |
| 26-202, gnl|dasNov1|scaffold_5880 (40320-40442) | |
| 26-202, gnl|echTel1|scaffold_318948 (5049-4921) | |
| 26-202, gnl|fr1|chrUn (138665322-138665182) | |
| 26-202, gnl|galGal2|chr15 (9293698-9293567) | |
| 26-202, gnl|hg17|chr12 (119226361-119226514) | |
| 26-202, gnl|Hg17|chr12 (119226556-119226381) | |
| 26-202, gnl|loxAfr1|scaffold_25855 (4427-4317) | |
| 26-202, gnl|mm7|chr5 (114691799-114691646) | |
| 26-202, gnl|Mm7|chr5 (114691602-114691777) | |
| 26-202, gnl|monDom2|scaffold_145 (2083156-2083007) | |
| 26-202, gnl|oryCun1|scaffold_87660 (8827-8674) | |
| 26-202, gnl|panTro1|chr10 (122230927-122231080) | |
| 26-202, gnl|rheMac2|chr11 (121334645-121334798) | |
| 26-202, gnl|rn3|chr12 (42272665-42272818) | |
| 26-202, gnl|tetNig1|chr4 (5214391-5214260) | |
| 328-540, gnl|bosTau2|chr2 (70450188-70450397) | |
| 328-540, gnl|Hg17|chr12 (119222840-119222637) | |
| 328-540, gnl|Mm7|chr5 (114695342-114695552) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 26-202, gnl|bosTau2|chr2 (70404219-70404394) | |
| 26-202, gnl|canFam2|chr26 (19278998-19279151) | |
| 26-202, gnl|danRer3|chrUn (141970299-141970165) | |
| 26-202, gnl|dasNov1|scaffold_5880 (40320-40442) | |
| 26-202, gnl|echTel1|scaffold_318948 (5049-4921) | |
| 26-202, gnl|fr1|chrUn (138665322-138665182) | |
| 26-202, gnl|galGal2|chr15 (9293698-9293567) | |
| 26-202, gnl|hg17|chr12 (119226361-119226514) | |
| 26-202, gnl|Hg17|chr12 (119226556-119226381) | |
| 26-202, gnl|loxAfr1|scaffold_25855 (4427-4317) | |
| 26-202, gnl|mm7|chr5 (114691799-114691646) | |
| 26-202, gnl|Mm7|chr5 (114691602-114691777) | |
| 26-202, gnl|monDom2|scaffold_145 (2083156-2083007) | |
| 26-202, gnl|oryCun1|scaffold_87660 (8827-8674) | |
| 26-202, gnl|panTro1|chr10 (122230927-122231080) | |
| 26-202, gnl|rheMac2|chr11 (121334645-121334798) | |
| 26-202, gnl|rn3|chr12 (42272665-42272818) | |
| 26-202, gnl|tetNig1|chr4 (5214391-5214260) | |
| 328-540, gnl|bosTau2|chr2 (70450188-70450397) | |
| 328-540, gnl|Hg17|chr12 (119222840-119222637) | |
| 328-540, gnl|Mm7|chr5 (114695342-114695552) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pan (15.8093) | |
| nlu (0.191681) |