Ss1.1-rpan010_k5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTTCCTCTAGGTGACCTTGAATGACCTTCCCAAGAATATGCTCCCAGAGAATTTTCATT TATTGGCAGCTTTGAGGTTTAGGGTTAAGTAGGGAAAAGTTCCTTGACTTTAAAGAGAAA GGAAAGTGGAATTCTTAAAAAATAAATTCTACACTGGGAGCAGAAAGGAATTAAATGCTT CCTAAAACAGAGAAAAATAAATCAAGATCTTCCTAGAAATAAATTGGGATGAAACTAAGT ATACTGGCTTTCGTTGGTAGGTGAAAAGAGGATGAGTCTTGAATTGTTTTCAAATTAGAT AAAAATGTATCTAGCAAAGTGTCTTAGTTTCCTTTGGAAGTATTTTTTCTTTTTATTAGG GCTTATGCCACA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTTCCTCTAGGTGACCTTGAATGACCTTCCCAAGAATATGCTCCCAGAGAATTTTCATT TATTGGCAGCTTTGAGGTTTAGGGTTAAGTAGGGAAAAGTTCCTTGACTTTAAAGAGAAA GGAAAGTGGAATTCTTAAAAAATAAATTCTACACTGGGAGCAGAAAGGAATTAAATGCTT CCTAAAACAGAGAAAAATAAATCAAGATCTTCCTAGAAATAAATTGGGATGAAACTAAGT ATACTGGCTTTCGTTGGTAGGTGAAAAGAGGATGAGTCTTGAATTGTTTTCAAATTAGAT AAAAATGTATCTAGCAAAGTGTCTTAGTTTCCTTTGGAAGTATTTTTTCTTTTTATTAGG GCTTATGCCACA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 64-174, + strand, RNAz p=0.981788 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 64-174, + strand, RNAz p=0.981788 |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 2-367, gnl|bosTau2|chr26 (11599392-11599760) | |
| 2-367, gnl|Hg17|chr10 (101455737-101456424) | |
| 2-367, gnl|Mm7|chr19 (43625376-43626042) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-367, gnl|bosTau2|chr26 (11599392-11599760) | |
| 2-367, gnl|Hg17|chr10 (101455737-101456424) | |
| 2-367, gnl|Mm7|chr19 (43625376-43626042) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pan (0.23596) |