Ss1.1-rpan018_j3.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGAAGGTGATCTCATTTTTCAAACTAAAGAAGTCTCAATTGCCTGCCTTGTGCAATTTAC CAGACCCTGGATGATGAGTGGGATACGCTGCCCATAAGAGAAGTCTCAGTAGAGCATGTG CAAAACTTCTGTGATGGATTCCTAAAAGGAAAGGGGTCGAGAGAAAACCATGAATCAGAA GAAACGACTTCGAAGGTGGAACTCTGATTTCTCCCTGATTCTTCAATGTGCTACCAAGCT ACTTCATGCCAAATAAAAAGGGGTAACTCAAACCTCGGAGACACTAAACAACAGGGTCAC CAGGCTCACATATACACACACAGAGATACACACACACACACACACACACATACTCACACA CACACATGCAAATGCACAGACAATATACACACAGCTCTAGATCATTCCTTAAAATCTTAT TTACTCTTCTTGTCTTTTCTTTTAAAGACACTACCTCTCTCACTACCCATCCAATTTTTT CTTATGTGTCCATACTGATTTGGCCCATACACTGTCATAAATGCCACAAGATGGAAGCTT TAAGAGAAATACTGTGCTCCTGCTATGAAGCGGCAACATTCCTAGAGGGAGATGGTTCTG ATGTGTCCTTTAATATTGAATTCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGAAGGTGATCTCATTTTTCAAACTAAAGAAGTCTCAATTGCCTGCCTTGTGCAATTTAC CAGACCCTGGATGATGAGTGGGATACGCTGCCCATAAGAGAAGTCTCAGTAGAGCATGTG CAAAACTTCTGTGATGGATTCCTAAAAGGAAAGGGGTCGAGAGAAAACCATGAATCAGAA GAAACGACTTCGAAGGTGGAACTCTGATTTCTCCCTGATTCTTCAATGTGCTACCAAGCT ACTTCATGCCAAATAAAAAGGGGTAACTCAAACCTCGGAGACACTAAACAACAGGGTCAC CAGGCTCACATATACACACACAGAGATACACACACACACACACACACACATACTCACACA CACACATGCAAATGCACAGACAATATACACACAGCTCTAGATCATTCCTTAAAATCTTAT TTACTCTTCTTGTCTTTTCTTTTAAAGACACTACCTCTCTCACTACCCATCCAATTTTTT CTTATGTGTCCATACTGATTTGGCCCATACACTGTCATAAATGCCACAAGATGGAAGCTT TAAGAGAAATACTGTGCTCCTGCTATGAAGCGGCAACATTCCTAGAGGGAGATGGTTCTG ATGTGTCCTTTAATATTGAATTCA |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 3-155, gnl|bosTau2|chr5 (57316612-57316763) | |
| 3-155, gnl|canFam2|chr27 (34719719-34719387) | |
| 3-155, gnl|dasNov1|scaffold_82522 (4913-5261) | |
| 3-155, gnl|echTel1|scaffold_281891 (13536-13890) | |
| 3-155, gnl|hg17|chr12 (14959677-14960032) | |
| 3-155, gnl|Hg17|chr12 (14959845-14959694) | |
| 3-155, gnl|loxAfr1|scaffold_11186 (3988-4336) | |
| 3-155, gnl|mm7|chr6 (136932568-136932888) | |
| 3-155, gnl|Mm7|chr6 (136932736-136932585) | |
| 3-155, gnl|oryCun1|scaffold_81570 (1522-1168) | |
| 3-155, gnl|panTro1|chrUn_random (41224736-41225091) | |
| 3-155, gnl|rheMac2|chr11 (15290535-15290885) | |
| 3-155, gnl|rn3|chr4 (174194638-174194982) | |
| 159-340, gnl|bosTau2|chr5 (57317658-57317853) | |
| 159-340, gnl|canFam2|chr27 (34720942-34720636) | |
| 159-340, gnl|dasNov1|scaffold_82522 (4240-4537) | |
| 159-340, gnl|echTel1|scaffold_281891 (12156-12482) | |
| 159-340, gnl|hg17|chr12 (14958648-14958991) | |
| 159-340, gnl|Hg17|chr12 (14958984-14958760) | |
| 159-340, gnl|loxAfr1|scaffold_8968 (55206-55540) | |
| 159-340, gnl|mm7|chr6 (136931798-136932071) | |
| 159-340, gnl|oryCun1|scaffold_155431 (200-501) | |
| 159-340, gnl|panTro1|chrUn_random (41223704-41224049) | |
| 159-340, gnl|rheMac2|chr11 (15289520-15289845) | |
| 159-340, gnl|rn3|chr4 (174193904-174194165) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-155, gnl|bosTau2|chr5 (57316612-57316763) | |
| 3-155, gnl|canFam2|chr27 (34719719-34719387) | |
| 3-155, gnl|dasNov1|scaffold_82522 (4913-5261) | |
| 3-155, gnl|echTel1|scaffold_281891 (13536-13890) | |
| 3-155, gnl|hg17|chr12 (14959677-14960032) | |
| 3-155, gnl|Hg17|chr12 (14959845-14959694) | |
| 3-155, gnl|loxAfr1|scaffold_11186 (3988-4336) | |
| 3-155, gnl|mm7|chr6 (136932568-136932888) | |
| 3-155, gnl|Mm7|chr6 (136932736-136932585) | |
| 3-155, gnl|oryCun1|scaffold_81570 (1522-1168) | |
| 3-155, gnl|panTro1|chrUn_random (41224736-41225091) | |
| 3-155, gnl|rheMac2|chr11 (15290535-15290885) | |
| 3-155, gnl|rn3|chr4 (174194638-174194982) | |
| 159-340, gnl|bosTau2|chr5 (57317658-57317853) | |
| 159-340, gnl|canFam2|chr27 (34720942-34720636) | |
| 159-340, gnl|dasNov1|scaffold_82522 (4240-4537) | |
| 159-340, gnl|echTel1|scaffold_281891 (12156-12482) | |
| 159-340, gnl|hg17|chr12 (14958648-14958991) | |
| 159-340, gnl|Hg17|chr12 (14958984-14958760) | |
| 159-340, gnl|loxAfr1|scaffold_8968 (55206-55540) | |
| 159-340, gnl|mm7|chr6 (136931798-136932071) | |
| 159-340, gnl|oryCun1|scaffold_155431 (200-501) | |
| 159-340, gnl|panTro1|chrUn_random (41223704-41224049) | |
| 159-340, gnl|rheMac2|chr11 (15289520-15289845) | |
| 159-340, gnl|rn3|chr4 (174193904-174194165) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pan (0.707881) |