Ss1.1-rpan029_g14.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CACGGCTGCCACTGCATCAGCAACTCCCGGACTTACCGCGTGGCCCTGGGGAAGAACAAC CTGGAGGTGGAAGACGAGGAAGGCTCCTTGTGTCGTGGGTGTGGATAGCATCTTTGTCCA TGAGAAGTGGAACTCCTTGCTGATTCGCAATGACATTGCCCTTATCAAGCTGGCTGAGCC CGTGGAACTGAGTGACACTATCCAGGTGTCATGCCTGCCGGAGGAGGGCTCCTTGCTGCC TCAGGACTACCCCTGCTATGTCACTGGCTGGGGCCGCCTCTGGACCAACGGCCCCATCGC CGCCGAGCTGCAGCAGGGCCTGCAGCCCGTGGTAGATCATGCCACCTGCTCCCAGAGAGA CTGGTGGGGCAGCACAGTGAGGGACACCATGGTGTGTGCCGGGGGGGACGGCGTCATCTC AGCCTGCAACGGGGACTCGGGCGGCCCACTGAACTGCCAGGCCGAGAACGGCTCCTGGGA GGTGCGGGGCATCGTCAGCTTCGGCTCCGGGTTGGGCTGCAACACCTACAAGAAGCCCAC AGTCTTCACCCGCGTGTCCGCCTACATCGACTGGATCGACCAGAAAATCCAGCTGTGATT CAGCCTTGGAAGTCAAGACCAAAAATCCCATCAGCTGCAATAAATCTTCTTTCCCCTCAA AAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CACGGCTGCCACTGCATCAGCAACTCCCGGACTTACCGCGTGGCCCTGGGGAAGAACAAC CTGGAGGTGGAAGACGAGGAAGGCTCCTTGTGTCGTGGGTGTGGATAGCATCTTTGTCCA TGAGAAGTGGAACTCCTTGCTGATTCGCAATGACATTGCCCTTATCAAGCTGGCTGAGCC CGTGGAACTGAGTGACACTATCCAGGTGTCATGCCTGCCGGAGGAGGGCTCCTTGCTGCC TCAGGACTACCCCTGCTATGTCACTGGCTGGGGCCGCCTCTGGACCAACGGCCCCATCGC CGCCGAGCTGCAGCAGGGCCTGCAGCCCGTGGTAGATCATGCCACCTGCTCCCAGAGAGA CTGGTGGGGCAGCACAGTGAGGGACACCATGGTGTGTGCCGGGGGGGACGGCGTCATCTC AGCCTGCAACGGGGACTCGGGCGGCCCACTGAACTGCCAGGCCGAGAACGGCTCCTGGGA GGTGCGGGGCATCGTCAGCTTCGGCTCCGGGTTGGGCTGCAACACCTACAAGAAGCCCAC AGTCTTCACCCGCGTGTCCGCCTACATCGACTGGATCGACCAGAAAATCCAGCTGTGATT CAGCCTTGGAAGTCAAGACCAAAAATCCCATCAGCTGCAATAAATCTTCTTTCCCCTCAA AAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 147-281, gnl|bosTau2|chr16 (38715062-38715196) | |
| 147-281, gnl|canFam2|chr2 (84976199-84976050) | |
| 147-281, gnl|danRer3|chr20 (44697538-44697687) | |
| 147-281, gnl|dasNov1|scaffold_174687 (3226-3375) | |
| 147-281, gnl|echTel1|scaffold_318851 (1082-1231) | |
| 147-281, gnl|fr1|chrUn (186458413-186458268) | |
| 147-281, gnl|galGal2|chrUn (136617488-136617637) | |
| 147-281, gnl|hg17|chr1 (15515214-15515363) | |
| 147-281, gnl|Hg17|chr1 (15515219-15515353) | |
| 147-281, gnl|loxAfr1|scaffold_22962 (33136-32994) | |
| 147-281, gnl|mm7|chr4 (141220082-141219933) | |
| 147-281, gnl|Mm7|chr4 (141220075-141219941) | |
| 147-281, gnl|monDom2|scaffold_109 (3850557-3850408) | |
| 147-281, gnl|oryCun1|scaffold_205027 (3213-3362) | |
| 147-281, gnl|panTro1|chr1 (15663183-15663332) | |
| 147-281, gnl|rheMac2|chr1 (18184787-18184936) | |
| 147-281, gnl|rn3|chr5 (160756950-160756801) | |
| 147-281, gnl|tetNig1|chr9 (1636482-1636627) | |
| 147-281, gnl|xenTro1|scaffold_1275 (62733-62584) | |
| 431-583, gnl|bosTau2|chr16 (38717279-38717431) | |
| 431-583, gnl|Hg17|chr1 (15517398-15517550) | |
| 431-583, gnl|Mm7|chr4 (141217246-141217094) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 147-281, gnl|bosTau2|chr16 (38715062-38715196) | |
| 147-281, gnl|canFam2|chr2 (84976199-84976050) | |
| 147-281, gnl|danRer3|chr20 (44697538-44697687) | |
| 147-281, gnl|dasNov1|scaffold_174687 (3226-3375) | |
| 147-281, gnl|echTel1|scaffold_318851 (1082-1231) | |
| 147-281, gnl|fr1|chrUn (186458413-186458268) | |
| 147-281, gnl|galGal2|chrUn (136617488-136617637) | |
| 147-281, gnl|hg17|chr1 (15515214-15515363) | |
| 147-281, gnl|Hg17|chr1 (15515219-15515353) | |
| 147-281, gnl|loxAfr1|scaffold_22962 (33136-32994) | |
| 147-281, gnl|mm7|chr4 (141220082-141219933) | |
| 147-281, gnl|Mm7|chr4 (141220075-141219941) | |
| 147-281, gnl|monDom2|scaffold_109 (3850557-3850408) | |
| 147-281, gnl|oryCun1|scaffold_205027 (3213-3362) | |
| 147-281, gnl|panTro1|chr1 (15663183-15663332) | |
| 147-281, gnl|rheMac2|chr1 (18184787-18184936) | |
| 147-281, gnl|rn3|chr5 (160756950-160756801) | |
| 147-281, gnl|tetNig1|chr9 (1636482-1636627) | |
| 147-281, gnl|xenTro1|scaffold_1275 (62733-62584) | |
| 431-583, gnl|bosTau2|chr16 (38717279-38717431) | |
| 431-583, gnl|Hg17|chr1 (15517398-15517550) | |
| 431-583, gnl|Mm7|chr4 (141217246-141217094) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pan (0.471921) |