Ss1.1-rpan029_k14.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGTCTGCCAAAATGGAGGGGATCTCTTGTGCTGTGAAAAATGTCCAAAGGTCTTTCATCT AACTTGTCATGTTCCAACACTTCTTAGCTTTCCAAGTGGGGACTGGATATGCACATTTTG CAGAGATATTGGGAAACCAGAAGTTGAATATGATTGTGATAATTTACAGCATAGCAAAAA GGGGAAAACTGTACAGGGGTTAAGCCCCGTGGACCAAAGGAAATGTGAACGTCTTCTGCT TTACCTCTATTGCCATGAATTAAGTATTGAATTTCAGGAGCCAGTTCCTGCTTCGATACC AAACTACTATAAAATTATAAAGAAACCAATGGATTTATCCACCGTGAAAAAGAAGCTTCA GAAAAAACATTCCCAACACTACCAAATCCCGGATGACTTTGTGGCTGATGTTCGTTTGAT CTTCAAGAACTGTGAAAGGTTTAATGAAATGATGAAAGTTGTTCAAGTTTATGCAGAAAC ACAAGAGATTAATTTGAAGGCTGATTCAGAAGTAGCTCAGGCAGGGAAAGCAGTTGCATT GTACTTTGAAGATAAACTCACAGAGATCTACTCAGACAGGACCTTCGCACCTTTGCCAGA GTTTGAGCAGGAAGAGGATGATGGTGAGGTAACTGAGGACTCTGATGAAGACTTTATACA GCCCCGCAGAAAACGCCTAAAGTCAGATGAGAGACCAGTACATATAAAGTAAAATGACAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGTCTGCCAAAATGGAGGGGATCTCTTGTGCTGTGAAAAATGTCCAAAGGTCTTTCATCT AACTTGTCATGTTCCAACACTTCTTAGCTTTCCAAGTGGGGACTGGATATGCACATTTTG CAGAGATATTGGGAAACCAGAAGTTGAATATGATTGTGATAATTTACAGCATAGCAAAAA GGGGAAAACTGTACAGGGGTTAAGCCCCGTGGACCAAAGGAAATGTGAACGTCTTCTGCT TTACCTCTATTGCCATGAATTAAGTATTGAATTTCAGGAGCCAGTTCCTGCTTCGATACC AAACTACTATAAAATTATAAAGAAACCAATGGATTTATCCACCGTGAAAAAGAAGCTTCA GAAAAAACATTCCCAACACTACCAAATCCCGGATGACTTTGTGGCTGATGTTCGTTTGAT CTTCAAGAACTGTGAAAGGTTTAATGAAATGATGAAAGTTGTTCAAGTTTATGCAGAAAC ACAAGAGATTAATTTGAAGGCTGATTCAGAAGTAGCTCAGGCAGGGAAAGCAGTTGCATT GTACTTTGAAGATAAACTCACAGAGATCTACTCAGACAGGACCTTCGCACCTTTGCCAGA GTTTGAGCAGGAAGAGGATGATGGTGAGGTAACTGAGGACTCTGATGAAGACTTTATACA GCCCCGCAGAAAACGCCTAAAGTCAGATGAGAGACCAGTACATATAAAGTAAAATGACAT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 95-227, gnl|bosTau2|chr3 (26763341-26763473) | |
| 95-227, gnl|canFam2|chr17 (55199214-55199352) | |
| 95-227, gnl|danRer3|chr8 (3578922-3578791) | |
| 95-227, gnl|dasNov1|scaffold_48132 (5198-5062) | |
| 95-227, gnl|echTel1|scaffold_315761 (55193-55331) | |
| 95-227, gnl|galGal2|chr26 (2412289-2412427) | |
| 95-227, gnl|hg17|chr1 (114657412-114657550) | |
| 95-227, gnl|Hg17|chr1 (114657549-114657417) | |
| 95-227, gnl|loxAfr1|scaffold_6810 (41901-41763) | |
| 95-227, gnl|mm7|chr3 (103140761-103140624) | |
| 95-227, gnl|Mm7|chr3 (103140623-103140756) | |
| 95-227, gnl|monDom2|scaffold_0 (435362-435224) | |
| 95-227, gnl|oryCun1|scaffold_173008 (12949-12811) | |
| 95-227, gnl|panTro1|chr1 (114447647-114447785) | |
| 95-227, gnl|rheMac2|chr1 (117390826-117390964) | |
| 95-227, gnl|rn3|chr2 (198558463-198558326) | |
| 95-227, gnl|xenTro1|scaffold_143 (437481-437343) | |
| 292-448, gnl|bosTau2|chr3 (26766601-26766757) | |
| 292-448, gnl|canFam2|chr17 (55195550-55195766) | |
| 292-448, gnl|danRer3|chr8 (3583301-3583102) | |
| 292-448, gnl|dasNov1|scaffold_15846 (6522-6669) | |
| 292-448, gnl|echTel1|scaffold_315761 (51153-51369) | |
| 292-448, gnl|fr1|chrUn (103375829-103375641) | |
| 292-448, gnl|galGal2|chr26 (2410513-2410699) | |
| 292-448, gnl|hg17|chr1 (114654100-114654313) | |
| 292-448, gnl|Hg17|chr1 (114654277-114654121) | |
| 292-448, gnl|loxAfr1|scaffold_6810 (46053-45839) | |
| 292-448, gnl|mm7|chr3 (103146158-103145947) | |
| 292-448, gnl|Mm7|chr3 (103145979-103146135) | |
| 292-448, gnl|monDom2|scaffold_0 (437989-437774) | |
| 292-448, gnl|oryCun1|scaffold_173008 (17779-17567) | |
| 292-448, gnl|panTro1|chr1 (114444296-114444509) | |
| 292-448, gnl|rheMac2|chr1 (117387479-117387692) | |
| 292-448, gnl|rn3|chr2 (198562938-198562728) | |
| 292-448, gnl|tetNig1|chrUn_random (101452366-101452554) | |
| 292-448, gnl|xenTro1|scaffold_143 (440692-440490) | |
| 494-720, gnl|bosTau2|chr3 (26768264-26768490) | |
| 494-720, gnl|Hg17|chr1 (114652530-114652304) | |
| 494-720, gnl|Mm7|chr3 (103147671-103147897) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 95-227, gnl|bosTau2|chr3 (26763341-26763473) | |
| 95-227, gnl|canFam2|chr17 (55199214-55199352) | |
| 95-227, gnl|danRer3|chr8 (3578922-3578791) | |
| 95-227, gnl|dasNov1|scaffold_48132 (5198-5062) | |
| 95-227, gnl|echTel1|scaffold_315761 (55193-55331) | |
| 95-227, gnl|galGal2|chr26 (2412289-2412427) | |
| 95-227, gnl|hg17|chr1 (114657412-114657550) | |
| 95-227, gnl|Hg17|chr1 (114657549-114657417) | |
| 95-227, gnl|loxAfr1|scaffold_6810 (41901-41763) | |
| 95-227, gnl|mm7|chr3 (103140761-103140624) | |
| 95-227, gnl|Mm7|chr3 (103140623-103140756) | |
| 95-227, gnl|monDom2|scaffold_0 (435362-435224) | |
| 95-227, gnl|oryCun1|scaffold_173008 (12949-12811) | |
| 95-227, gnl|panTro1|chr1 (114447647-114447785) | |
| 95-227, gnl|rheMac2|chr1 (117390826-117390964) | |
| 95-227, gnl|rn3|chr2 (198558463-198558326) | |
| 95-227, gnl|xenTro1|scaffold_143 (437481-437343) | |
| 292-448, gnl|bosTau2|chr3 (26766601-26766757) | |
| 292-448, gnl|canFam2|chr17 (55195550-55195766) | |
| 292-448, gnl|danRer3|chr8 (3583301-3583102) | |
| 292-448, gnl|dasNov1|scaffold_15846 (6522-6669) | |
| 292-448, gnl|echTel1|scaffold_315761 (51153-51369) | |
| 292-448, gnl|fr1|chrUn (103375829-103375641) | |
| 292-448, gnl|galGal2|chr26 (2410513-2410699) | |
| 292-448, gnl|hg17|chr1 (114654100-114654313) | |
| 292-448, gnl|Hg17|chr1 (114654277-114654121) | |
| 292-448, gnl|loxAfr1|scaffold_6810 (46053-45839) | |
| 292-448, gnl|mm7|chr3 (103146158-103145947) | |
| 292-448, gnl|Mm7|chr3 (103145979-103146135) | |
| 292-448, gnl|monDom2|scaffold_0 (437989-437774) | |
| 292-448, gnl|oryCun1|scaffold_173008 (17779-17567) | |
| 292-448, gnl|panTro1|chr1 (114444296-114444509) | |
| 292-448, gnl|rheMac2|chr1 (117387479-117387692) | |
| 292-448, gnl|rn3|chr2 (198562938-198562728) | |
| 292-448, gnl|tetNig1|chrUn_random (101452366-101452554) | |
| 292-448, gnl|xenTro1|scaffold_143 (440692-440490) | |
| 494-720, gnl|bosTau2|chr3 (26768264-26768490) | |
| 494-720, gnl|Hg17|chr1 (114652530-114652304) | |
| 494-720, gnl|Mm7|chr3 (103147671-103147897) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cte (0.29274) | |
| pan (0.23596) | |
| fhi (0.169578) |