Non-Coding RNA Search

Ss1.1-rpbfe0101_d8.5

Sequence:


               
               TAAATACTTTTATTTGAATTTAAGATTTGCACATAGAAAATAGTAAGCTTGCATATAAAG
CTATTACATGACTGGAATGTAAGTCATGAACTTTAACTGAGGTGTGCACATTGACTAATT
CTGAAAGATTGCTGAACTTAATAATTTTGGAAGAAACTAAGCCAAAATGTGATTATACTT
AAAATCTTTTCAGAATGTGGGAAACCAGTTAAACATGTGATCTGATTTAGTTTAGGAGTT
TTTGTTTAATCATCATGGTGGTCCTGACTGGATAATTCAGTTATAAAAACAAGATAATTC
TAATAAATGAACTAACTGAAAGTAATAATTATAGGAAATAATTACTCTGTTTTCCTTAGC
TTATGGAAGAACAGGTTTGCTTTGTTTTTAAGGAAATTAATCCATGTTTCTTATCCTGCT
AGAATTAAAAATGATTTGACTCTATTTAAATTAATGTTGATTTGTAACTTTTTATAGTAA
GACAATGACAGCTGTTATAATTGTGGTGGGTGTAATAGTTTTTTAAAGAAGGGAATCTGT
TTATTGCTTATCAAAACATTTTCTAAAGTGAGAGAAGAAAGTTTACACACTTTCTAAGCA
CATTTGTGGTTTTTTTTTCAGTGCTATTATCATTTTTTTAAACAAGTAATTTAACTTCAT
TTCTTTTGGTAAAGAAGTTAGTAGTAAGTATCCTTTAAAGTTCTGTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAAATACTTTTATTTGAATTTAAGATTTGCACATAGAAAATAGTAAGCTTGCATATAAAG
CTATTACATGACTGGAATGTAAGTCATGAACTTTAACTGAGGTGTGCACATTGACTAATT
CTGAAAGATTGCTGAACTTAATAATTTTGGAAGAAACTAAGCCAAAATGTGATTATACTT
AAAATCTTTTCAGAATGTGGGAAACCAGTTAAACATGTGATCTGATTTAGTTTAGGAGTT
TTTGTTTAATCATCATGGTGGTCCTGACTGGATAATTCAGTTATAAAAACAAGATAATTC
TAATAAATGAACTAACTGAAAGTAATAATTATAGGAAATAATTACTCTGTTTTCCTTAGC
TTATGGAAGAACAGGTTTGCTTTGTTTTTAAGGAAATTAATCCATGTTTCTTATCCTGCT
AGAATTAAAAATGATTTGACTCTATTTAAATTAATGTTGATTTGTAACTTTTTATAGTAA
GACAATGACAGCTGTTATAATTGTGGTGGGTGTAATAGTTTTTTAAAGAAGGGAATCTGT
TTATTGCTTATCAAAACATTTTCTAAAGTGAGAGAAGAAAGTTTACACACTTTCTAAGCA
CATTTGTGGTTTTTTTTTCAGTGCTATTATCATTTTTTTAAACAAGTAATTTAACTTCAT
TTCTTTTGGTAAAGAAGTTAGTAGTAAGTATCCTTTAAAGTTCTGTGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-704, gnl|bosTau2|chr17 (12747044-12746339)
               

               
               1-704, gnl|Hg17|chr4 (140753467-140754161)
               

               
               1-704, gnl|Mm7|chr3 (51619086-51619955)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-704, gnl|bosTau2|chr17 (12747044-12746339)
               

               
               1-704, gnl|Hg17|chr4 (140753467-140754161)
               

               
               1-704, gnl|Mm7|chr3 (51619086-51619955)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               mgp (0.230681)
               

               
               bfe (0.149858)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mgp (0.230681)
               

               
               bfe (0.149858)

	1-704, gnl\|bosTau2\|chr17 (12747044-12746339)
	1-704, gnl\|Hg17\|chr4 (140753467-140754161)
	1-704, gnl\|Mm7\|chr3 (51619086-51619955)