Non-Coding RNA Search

Ss1.1-rpbfe0105_p17.5

Sequence:


               
               AGAAATCTTCCTAATATATATTCCAGAGCCTACTGTACATAATTTAAACTCATCTCTGAA
ATATGGGGCATGTGCATAATTGCCTTTTGTCTTCCACTTATTACGGGAGGTTTTCTAGAA
TATTAAAGTGAGGCAGATCCACTATGTTCTGTCACTTCTTACCCACGTGATTGCAACTAT
GATTTTTTTTCCAATTTACCTCTTTGTATCTGCATTGACTTCAGGAAAAGGATCACTGAG
TTTAAATGATTCTTGTCTAAGAATGAAAGCAAGAGCCATTTTCAGCTATGTGGATGCACC
TAGAGAATATTATGCTTAGTGAAATGTCAGACCAAGAAAGGCAAATGCTATACATCACTT
ATATGTGGAATCTGAAAAAATAATACAAATGAGTGTAGACACAAAGCAGAAACAGAACTA
CAGTTACTAAAAACAAACTTGTGGTTACCGAAGGGGAGAGGGAAAAGGGGAGGGGAAAAT
TAGGGGTATGAGATCAACAGATACAAACTACTCTGTATAAAATAAGTAAGCAAGCAAGGA
CATACTGTATAGCACAGGCAATTATAGCCATTATCTTGTAATAACCTATAATAGCGTATA
ATCTGTAAAACTACTGAATCACAATGTTGTACACCTGAAACTAATATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAAATCTTCCTAATATATATTCCAGAGCCTACTGTACATAATTTAAACTCATCTCTGAA
ATATGGGGCATGTGCATAATTGCCTTTTGTCTTCCACTTATTACGGGAGGTTTTCTAGAA
TATTAAAGTGAGGCAGATCCACTATGTTCTGTCACTTCTTACCCACGTGATTGCAACTAT
GATTTTTTTTCCAATTTACCTCTTTGTATCTGCATTGACTTCAGGAAAAGGATCACTGAG
TTTAAATGATTCTTGTCTAAGAATGAAAGCAAGAGCCATTTTCAGCTATGTGGATGCACC
TAGAGAATATTATGCTTAGTGAAATGTCAGACCAAGAAAGGCAAATGCTATACATCACTT
ATATGTGGAATCTGAAAAAATAATACAAATGAGTGTAGACACAAAGCAGAAACAGAACTA
CAGTTACTAAAAACAAACTTGTGGTTACCGAAGGGGAGAGGGAAAAGGGGAGGGGAAAAT
TAGGGGTATGAGATCAACAGATACAAACTACTCTGTATAAAATAAGTAAGCAAGCAAGGA
CATACTGTATAGCACAGGCAATTATAGCCATTATCTTGTAATAACCTATAATAGCGTATA
ATCTGTAAAACTACTGAATCACAATGTTGTACACCTGAAACTAATATA

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

Help | Less info


               
               257-610, gnl|bosTau2|chr1 (20000982-20000630)
               

               
               257-610, gnl|hg17|chr3 (88310462-88311352)
               

               
               257-610, gnl|Hg17|chr3 (88310878-88311254)
               

               
               257-610, gnl|panTro1|chr2 (90684081-90684972)
               

               
               257-610, gnl|rheMac2|chr2 (12413401-12414290)

Aligned organism(s): 5 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               257-610, gnl|bosTau2|chr1 (20000982-20000630)
               

               
               257-610, gnl|hg17|chr3 (88310462-88311352)
               

               
               257-610, gnl|Hg17|chr3 (88310878-88311254)
               

               
               257-610, gnl|panTro1|chr2 (90684081-90684972)
               

               
               257-610, gnl|rheMac2|chr2 (12413401-12414290)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               bfe (0.299715)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bfe (0.299715)

	257-610, gnl\|bosTau2\|chr1 (20000982-20000630)
	257-610, gnl\|hg17\|chr3 (88310462-88311352)
	257-610, gnl\|Hg17\|chr3 (88310878-88311254)
	257-610, gnl\|panTro1\|chr2 (90684081-90684972)
	257-610, gnl\|rheMac2\|chr2 (12413401-12414290)