Ss1.1-rpbfe0107_g1.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCACGAGGGTTTCTTGATAAATATGAGCTGCAAATACCGTCAGATGAAAAACTTGAGGAC TTTTGGATAGATTTTAATCTTGGGAGCCAGACTCTGTCTTTCTACATCGCTGGAGACAAT GATGATCATCAGTGGGAAGCAGTCACTGTGCCTGAGGAAAAAGTGCAAATATACAGCATA GAAGTGAGAGACTCGAAGAAGCTCCTGACTATAATTCTGAAAGATACAGTACAAATTAGT AAACGAAAAGGGAAAGAATTGCTTTTGTATTTTGATGCATCATTAGAGATCACTAATGTG ACACAACAAATATTTGGTGCAAATAAATACAGGGAATTTTCCCGAAAACAAGGTATTTCA GTTGCCAAAACATCTGTGCATATACTTTTCGATGCAAGTGGATCCCAGATTCTAGTCCCA GAAAGTCAAATTTCACCAGTTGAAGAACTTTCTACTTTGAAAGAAAAAGCTAACCCTCAA GAGGAATTTGTTAAACCTCCAAAACATATCAAAAACAGTAATAAAGGGGACAGAAAACAT GGTCAGCCCGAGATAATTACTCCTAGCAAAAGAAAAATGTCTGAAGCATCAATGATTGTT CCTGGTGCAGAGAGATACACTGTGAGGAGTCCAATACTTTTAATCAACACATCAACACCA CAAAGAGGAAGAATTAAACCACCACTGCAAATGACAAGTTCTATGGAAAAACCTGGTTTT TCTAAAACATCGGAAAATGGAGTGGATAATGCTGTATCACTTAAATCTAGACCATGTGAA GAAAGAAATAGAGAAGATAATACAGACAAAGTAACTTTACTTTGAAAGCATTTTTAAATA AAATTTTATCAAGTTATTGTAGAAATACATATTGAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCACGAGGGTTTCTTGATAAATATGAGCTGCAAATACCGTCAGATGAAAAACTTGAGGAC TTTTGGATAGATTTTAATCTTGGGAGCCAGACTCTGTCTTTCTACATCGCTGGAGACAAT GATGATCATCAGTGGGAAGCAGTCACTGTGCCTGAGGAAAAAGTGCAAATATACAGCATA GAAGTGAGAGACTCGAAGAAGCTCCTGACTATAATTCTGAAAGATACAGTACAAATTAGT AAACGAAAAGGGAAAGAATTGCTTTTGTATTTTGATGCATCATTAGAGATCACTAATGTG ACACAACAAATATTTGGTGCAAATAAATACAGGGAATTTTCCCGAAAACAAGGTATTTCA GTTGCCAAAACATCTGTGCATATACTTTTCGATGCAAGTGGATCCCAGATTCTAGTCCCA GAAAGTCAAATTTCACCAGTTGAAGAACTTTCTACTTTGAAAGAAAAAGCTAACCCTCAA GAGGAATTTGTTAAACCTCCAAAACATATCAAAAACAGTAATAAAGGGGACAGAAAACAT GGTCAGCCCGAGATAATTACTCCTAGCAAAAGAAAAATGTCTGAAGCATCAATGATTGTT CCTGGTGCAGAGAGATACACTGTGAGGAGTCCAATACTTTTAATCAACACATCAACACCA CAAAGAGGAAGAATTAAACCACCACTGCAAATGACAAGTTCTATGGAAAAACCTGGTTTT TCTAAAACATCGGAAAATGGAGTGGATAATGCTGTATCACTTAAATCTAGACCATGTGAA GAAAGAAATAGAGAAGATAATACAGACAAAGTAACTTTACTTTGAAAGCATTTTTAAATA AAATTTTATCAAGTTATTGTAGAAATACATATTGAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 22-124, gnl|bosTau2|chr13 (38653044-38652942) | |
| 22-124, gnl|Hg17|chr20 (57920301-57920199) | |
| 22-124, gnl|Mm7|chr2 (178892705-178892603) | |
| 183-334, gnl|bosTau2|chr13 (38641647-38641496) | |
| 183-334, gnl|canFam2|chr24 (47490404-47490642) | |
| 183-334, gnl|dasNov1|scaffold_6401 (75519-75296) | |
| 183-334, gnl|echTel1|scaffold_51915 (745-542) | |
| 183-334, gnl|galGal2|chr20 (6580393-6580596) | |
| 183-334, gnl|hg17|chr20 (57910077-57910288) | |
| 183-334, gnl|Hg17|chr20 (57910262-57910111) | |
| 183-334, gnl|loxAfr1|scaffold_190381 (917-1135) | |
| 183-334, gnl|mm7|chr2 (178884342-178884558) | |
| 183-334, gnl|Mm7|chr2 (178884529-178884378) | |
| 183-334, gnl|monDom2|scaffold_1 (174849122-174849340) | |
| 183-334, gnl|oryCun1|scaffold_3995 (7-222) | |
| 183-334, gnl|panTro1|chr21 (60911973-60912183) | |
| 183-334, gnl|rheMac2|chr10 (4637428-4637213) | |
| 183-334, gnl|rn3|chr3 (167382321-167382537) | |
| 406-591, gnl|bosTau2|chr13 (38639668-38639481) | |
| 406-591, gnl|Hg17|chr20 (57908737-57908549) | |
| 406-591, gnl|Mm7|chr2 (178882880-178882712) | |
| 653-876, gnl|bosTau2|chr13 (38636083-38635858) | |
| 653-876, gnl|Hg17|chr20 (57904047-57903823) | |
| 653-876, gnl|Mm7|chr2 (178880461-178880254) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 22-124, gnl|bosTau2|chr13 (38653044-38652942) | |
| 22-124, gnl|Hg17|chr20 (57920301-57920199) | |
| 22-124, gnl|Mm7|chr2 (178892705-178892603) | |
| 183-334, gnl|bosTau2|chr13 (38641647-38641496) | |
| 183-334, gnl|canFam2|chr24 (47490404-47490642) | |
| 183-334, gnl|dasNov1|scaffold_6401 (75519-75296) | |
| 183-334, gnl|echTel1|scaffold_51915 (745-542) | |
| 183-334, gnl|galGal2|chr20 (6580393-6580596) | |
| 183-334, gnl|hg17|chr20 (57910077-57910288) | |
| 183-334, gnl|Hg17|chr20 (57910262-57910111) | |
| 183-334, gnl|loxAfr1|scaffold_190381 (917-1135) | |
| 183-334, gnl|mm7|chr2 (178884342-178884558) | |
| 183-334, gnl|Mm7|chr2 (178884529-178884378) | |
| 183-334, gnl|monDom2|scaffold_1 (174849122-174849340) | |
| 183-334, gnl|oryCun1|scaffold_3995 (7-222) | |
| 183-334, gnl|panTro1|chr21 (60911973-60912183) | |
| 183-334, gnl|rheMac2|chr10 (4637428-4637213) | |
| 183-334, gnl|rn3|chr3 (167382321-167382537) | |
| 406-591, gnl|bosTau2|chr13 (38639668-38639481) | |
| 406-591, gnl|Hg17|chr20 (57908737-57908549) | |
| 406-591, gnl|Mm7|chr2 (178882880-178882712) | |
| 653-876, gnl|bosTau2|chr13 (38636083-38635858) | |
| 653-876, gnl|Hg17|chr20 (57904047-57903823) | |
| 653-876, gnl|Mm7|chr2 (178880461-178880254) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| gul (0.177588) | |
| bfe (0.149858) | |
| thg (0.126791) |