Non-Coding RNA Search

Ss1.1-rpbfe0126_i7.5

Sequence:


               
               GTTCAGGTCATTGAGAAGGGGAAAGCAGTGAGGGCTCCCGAAGAGCAGAAGTCATCCCTC
AAGAGAGTTGATGCCAACTGTCAAAAAGCTAATCTGTTACCCTAGACCCAGAGATTCCAC
TTCAAGTTTTTGCTCTTGCAAATGGAAAAAAAAAAATATATATATATATATATATATACA
CACACACACACACAATTTAGTACAGGCTTATTTTGAGCAGCAAAAGTGAGGGGAGTATTA
AATTGTGATATACTGATGCAATGGATACTTTCTGTGGAGTAATATAAGAGAATGAAGAAG
TTCTTCATGTAATTGTATAGTAGTATGGAGTTATCACCAAGATGTGTTGTTTGAAAATAT
TTATTTCCAATGTATATTTTTAAAATGGAAAAAAGGCAAAAACAAATATACAGGTTAATA
TATCTATAAATGTCATAAACTTTTTCTGGAGAAATACATTAAAAAGTGATAACAGAAAAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTCAGGTCATTGAGAAGGGGAAAGCAGTGAGGGCTCCCGAAGAGCAGAAGTCATCCCTC
AAGAGAGTTGATGCCAACTGTCAAAAAGCTAATCTGTTACCCTAGACCCAGAGATTCCAC
TTCAAGTTTTTGCTCTTGCAAATGGAAAAAAAAAAATATATATATATATATATATATACA
CACACACACACACAATTTAGTACAGGCTTATTTTGAGCAGCAAAAGTGAGGGGAGTATTA
AATTGTGATATACTGATGCAATGGATACTTTCTGTGGAGTAATATAAGAGAATGAAGAAG
TTCTTCATGTAATTGTATAGTAGTATGGAGTTATCACCAAGATGTGTTGTTTGAAAATAT
TTATTTCCAATGTATATTTTTAAAATGGAAAAAAGGCAAAAACAAATATACAGGTTAATA
TATCTATAAATGTCATAAACTTTTTCTGGAGAAATACATTAAAAAGTGATAACAGAAAAA
AAAAAAAAAAAA

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

Help | Less info


               
               1-171, gnl|bosTau2|chr1 (43209567-43209398)
               

               
               1-171, gnl|Hg17|chr3 (197723157-197722993)
               


               
               182-474, gnl|bosTau2|chr1 (43209416-43209146)
               

               
               182-474, gnl|Hg17|chr3 (197723011-197722708)

Aligned organism(s): 4 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-171, gnl|bosTau2|chr1 (43209567-43209398)
               

               
               1-171, gnl|Hg17|chr3 (197723157-197722993)
               


               
               182-474, gnl|bosTau2|chr1 (43209416-43209146)
               

               
               182-474, gnl|Hg17|chr3 (197723011-197722708)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               bfe (0.299715)
               

               
               isp (0.150376)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bfe (0.299715)
               

               
               isp (0.150376)

	1-171, gnl\|bosTau2\|chr1 (43209567-43209398)
	1-171, gnl\|Hg17\|chr3 (197723157-197722993)

	182-474, gnl\|bosTau2\|chr1 (43209416-43209146)
	182-474, gnl\|Hg17\|chr3 (197723011-197722708)