Non-Coding RNA Search

Ss1.1-rpbfe0137_j15.5

Sequence:


               
               GGTCACTGATCGCGTCACCAGAGCTATTTCTCACAGATCTCCTCTGATGATGTGTTCAGA
AGAGGCTGCCAGTGTTAACACCTTGTCTGGCACAATGGTGGTGCAGCGAGGGAGCCCACA
TCACCGTTTGCCAGGTGGCTTTGAGCATGCTCAGACGAGGACGCGTCCCCTTCCCACCTT
CGGAACCCAGGATCCTCTTCCTGTCTGATCTGAAAAAGAATAAAGTCAATCAACAAACAA
AAAAGCCCTTTTGGGCACTTCCCACATTCTGTCAACAGATAGAATATTGTGCCTTACAGT
AAACCAATTTGAAAACTGTTCCTTCACAGTTTCAGTTTGTCCGAAACTTGGTGTATCACC
AGGACAGATAACCACCTTGTGTTGCACCAGAAAAACAGCAGAACAGGTGGCCTGCCTACA
GTGGGGTAACAGAAGAGATTAAGTCACTCTTAATCTCTGTGCAAAGATTTGTCAGTCAAA
TTCAGAGACAAAAACATATTTTAGTATCATGCCGTTTGTGCACAAAAAATAGATAATAAT
TCTCTAAAAATTGTTTTCGTTAGTCTCTAGTGAGCTAAGATTCATAGTGTCAACAGCATG
CTCCAGTATGAAGGGTTTTTTTTTTTTTTAAAGCACATTGGTTTAAGGACAAGCCTACAT
TCTCAGCGAATATGGCAGTTAGTATTTCTTTTAAAAACAAACAAGCATCTTGAGCCAAAG
TTGCATTTTGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTCACTGATCGCGTCACCAGAGCTATTTCTCACAGATCTCCTCTGATGATGTGTTCAGA
AGAGGCTGCCAGTGTTAACACCTTGTCTGGCACAATGGTGGTGCAGCGAGGGAGCCCACA
TCACCGTTTGCCAGGTGGCTTTGAGCATGCTCAGACGAGGACGCGTCCCCTTCCCACCTT
CGGAACCCAGGATCCTCTTCCTGTCTGATCTGAAAAAGAATAAAGTCAATCAACAAACAA
AAAAGCCCTTTTGGGCACTTCCCACATTCTGTCAACAGATAGAATATTGTGCCTTACAGT
AAACCAATTTGAAAACTGTTCCTTCACAGTTTCAGTTTGTCCGAAACTTGGTGTATCACC
AGGACAGATAACCACCTTGTGTTGCACCAGAAAAACAGCAGAACAGGTGGCCTGCCTACA
GTGGGGTAACAGAAGAGATTAAGTCACTCTTAATCTCTGTGCAAAGATTTGTCAGTCAAA
TTCAGAGACAAAAACATATTTTAGTATCATGCCGTTTGTGCACAAAAAATAGATAATAAT
TCTCTAAAAATTGTTTTCGTTAGTCTCTAGTGAGCTAAGATTCATAGTGTCAACAGCATG
CTCCAGTATGAAGGGTTTTTTTTTTTTTTAAAGCACATTGGTTTAAGGACAAGCCTACAT
TCTCAGCGAATATGGCAGTTAGTATTTCTTTTAAAAACAAACAAGCATCTTGAGCCAAAG
TTGCATTTTGAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               118-732, gnl|bosTau2|chr9 (41891376-41892003)
               

               
               118-732, gnl|Hg17|chr6 (133894125-133894764)
               

               
               118-732, gnl|Mm7|chr10 (22860519-22859907)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               118-732, gnl|bosTau2|chr9 (41891376-41892003)
               

               
               118-732, gnl|Hg17|chr6 (133894125-133894764)
               

               
               118-732, gnl|Mm7|chr10 (22860519-22859907)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               bfe (0.599431)
               

               
               sme (0.305437)
               

               
               ldo (0.0970026)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bfe (0.599431)
               

               
               sme (0.305437)
               

               
               ldo (0.0970026)

	118-732, gnl\|bosTau2\|chr9 (41891376-41892003)
	118-732, gnl\|Hg17\|chr6 (133894125-133894764)
	118-732, gnl\|Mm7\|chr10 (22860519-22859907)