Non-Coding RNA Search

Ss1.1-rpfco0101_l8.5

Sequence:


               
               GGTTACAAAGGAAAGGAGAGCATATGAAATCAGTGAAGGGGTTGAGATAATATATTATGT
CTGTGTAATATAAATCGAGTTTTAAATTATTTTTTTATGAAATCAATAAAGATGATTCAA
TTCTTTAAAAGTAAATCTTTGTGTAATTTTATGAGAAAGCAGCTATTAAAATACAGTGAT
TCAAGTCTATAAGGCAATTTATATGCTATATTTAGTTTTCCATTCTGAATAATAAAGGGA
ATAAATATATTAATTAGAAAATCATTTTAAGACCAGCTTTCTTTCGTTGCTTTTTAAAAA
CATTGAATTTCTTTAAGCCATAAGGATGCATAAATGATACAGGGCATGGCCTCATGAGTA
ACATCAACAGATATTGCAGAAATAACAGAACACATCTAGAAATGTATGGCAGTAATGTTA
ATCTATAGTATCTTTTGCATGATTTGTACATTGACATTGTATGAAATGAGCACAGTGAGT
TATTTTTTTTGTTATTGTTCTCGCATCCAAAGAGCTGGGGAGAAAAATATATTAAGAATG
TATTTATAATCACTATTTTGAAATAAAGTAAAGAAAACACATTGTATTGTTTTTACCCTG
ATTTAATTATTAGTATTTAGGTTAGTTTATGAGACAAGAAAATCAAGTAATGCTATAAAG
GCTAATGTAAATCACAGAAAGGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTTACAAAGGAAAGGAGAGCATATGAAATCAGTGAAGGGGTTGAGATAATATATTATGT
CTGTGTAATATAAATCGAGTTTTAAATTATTTTTTTATGAAATCAATAAAGATGATTCAA
TTCTTTAAAAGTAAATCTTTGTGTAATTTTATGAGAAAGCAGCTATTAAAATACAGTGAT
TCAAGTCTATAAGGCAATTTATATGCTATATTTAGTTTTCCATTCTGAATAATAAAGGGA
ATAAATATATTAATTAGAAAATCATTTTAAGACCAGCTTTCTTTCGTTGCTTTTTAAAAA
CATTGAATTTCTTTAAGCCATAAGGATGCATAAATGATACAGGGCATGGCCTCATGAGTA
ACATCAACAGATATTGCAGAAATAACAGAACACATCTAGAAATGTATGGCAGTAATGTTA
ATCTATAGTATCTTTTGCATGATTTGTACATTGACATTGTATGAAATGAGCACAGTGAGT
TATTTTTTTTGTTATTGTTCTCGCATCCAAAGAGCTGGGGAGAAAAATATATTAAGAATG
TATTTATAATCACTATTTTGAAATAAAGTAAAGAAAACACATTGTATTGTTTTTACCCTG
ATTTAATTATTAGTATTTAGGTTAGTTTATGAGACAAGAAAATCAAGTAATGCTATAAAG
GCTAATGTAAATCACAGAAAGGAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-684, gnl|bosTau2|chrX (7789446-7790113)
               

               
               1-684, gnl|Hg17|chrX (142438812-142438139)
               

               
               1-684, gnl|Mm7|chrX (59662053-59661366)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-684, gnl|bosTau2|chrX (7789446-7790113)
               

               
               1-684, gnl|Hg17|chrX (142438812-142438139)
               

               
               1-684, gnl|Mm7|chrX (59662053-59661366)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fco (0.157208)
               

               
               ret (0.128733)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.157208)
               

               
               ret (0.128733)

	1-684, gnl\|bosTau2\|chrX (7789446-7790113)
	1-684, gnl\|Hg17\|chrX (142438812-142438139)
	1-684, gnl\|Mm7\|chrX (59662053-59661366)