Non-Coding RNA Search

Ss1.1-rpfco0102_e6.5

Sequence:


               
               GTAGAATGGCCTATTAGAATTTGTAGTAGTTATCAGAACAATGGTTTGAATAATTCAGAA
TTCATTCCTTTTGGCTTTAAATGTGTTCTTGTGCTTAGAGTTCATTGTGGGAGGGTCTGC
TATTGCAAGCATTGACATAATTTCAGTAAGAAATGAAACATGACTATAAAAATCTGATCT
GGAAGATACTTCACCATTTTATTCTTCCCTCTGTGTCAAGGGTGAGTTACTTGTGCATGC
TTACATTAGAAAGCATTGGTCTCTATCAAGGCATTGCTAAAGTCACCTAAAACTCTGTAT
ATTTGATGAAGTATCCAGTTAGAGGGTGATTGTGAGAATCTGAAAGCGTAATCTGCTATC
GATAGTCTGTACAATGTGATAGTGATTCTTTTTCAATTAAACCTTTTTTTTTTTTTCAGA
CAGCCGGTAGCATTCTTTCTGTTCATAATTGGTGAGAATGGTTAGGTACTACTTTTTAAA
TAAAAGAATAACTTAGAACTCTACCTTCTAGGTGTAACCCTGAGGGCATCTTTCATCCCA
GTTTTATAGATACATGTAGGGTCTGTGGAATTTGGTATTTTAGATGTGTGGAGTCTTATT
ATTACTTAGAATAAAATTTATATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTAGAATGGCCTATTAGAATTTGTAGTAGTTATCAGAACAATGGTTTGAATAATTCAGAA
TTCATTCCTTTTGGCTTTAAATGTGTTCTTGTGCTTAGAGTTCATTGTGGGAGGGTCTGC
TATTGCAAGCATTGACATAATTTCAGTAAGAAATGAAACATGACTATAAAAATCTGATCT
GGAAGATACTTCACCATTTTATTCTTCCCTCTGTGTCAAGGGTGAGTTACTTGTGCATGC
TTACATTAGAAAGCATTGGTCTCTATCAAGGCATTGCTAAAGTCACCTAAAACTCTGTAT
ATTTGATGAAGTATCCAGTTAGAGGGTGATTGTGAGAATCTGAAAGCGTAATCTGCTATC
GATAGTCTGTACAATGTGATAGTGATTCTTTTTCAATTAAACCTTTTTTTTTTTTTCAGA
CAGCCGGTAGCATTCTTTCTGTTCATAATTGGTGAGAATGGTTAGGTACTACTTTTTAAA
TAAAAGAATAACTTAGAACTCTACCTTCTAGGTGTAACCCTGAGGGCATCTTTCATCCCA
GTTTTATAGATACATGTAGGGTCTGTGGAATTTGGTATTTTAGATGTGTGGAGTCTTATT
ATTACTTAGAATAAAATTTATATA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               141-624, gnl|bosTau2|chr2 (85750384-85749896)
               

               
               141-624, gnl|Hg17|chr1 (20848149-20845942)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               141-624, gnl|bosTau2|chr2 (85750384-85749896)
               

               
               141-624, gnl|Hg17|chr1 (20848149-20845942)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               fco (0.314416)
               

               
               rec (0.17307)
               

               
               jca (0.11396)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.314416)
               

               
               rec (0.17307)
               

               
               jca (0.11396)

	141-624, gnl\|bosTau2\|chr2 (85750384-85749896)
	141-624, gnl\|Hg17\|chr1 (20848149-20845942)