Non-Coding RNA Search

Ss1.1-rpfco0103_h16.5

Sequence:


               
               GATATACTTCCAAACATGCAGTGCTATTAGGTAGCATTAATGAAGAGGAACAGTGAGGAA
AGAATAAGAAAACATAAAACAAGAGCAGGTTTGCAAAGTAAAAGGATGATTTTTGAAGTT
TTTAAATGAGTAATTTGGGATTTATTTCCATTTTTATTCATATTGCTATCTACAGAAATC
CCTTAACACCAGAAAGAGATTTGACCCCACATTTTGATGTGTATAATGTTGCTTGTGTTT
CAAGCCCTCTTAATCTTGTTGTTGCTCATTTTACTTATATATTGCCATGATTGGGTGGGA
GAGGGTCTAGAAAATTCAGCATAACTTTAATAGAATTATGTTCAATTCATAGCCCTTCAC
TTATCATAAATGTGTTTTAGAAAACCCATTTACAAGAAAGAATGCTATAAAGATGCACCT
TGCCATTTGTGATAGATGTATTCCTAGAAATATCTGTGTAAATAAATCTATTAACTTCAG
AAAGGAACAAGCTATGTAAAAAAAAATGGTGGTGAATTATTTTGTAAAATGATGAATTAT
TTTTTAAAGTAATAATCTTCCTCAAACTGTAACTGTTTCATAAGTTGGATATTTGTATAT
CAAAATTTCTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATATACTTCCAAACATGCAGTGCTATTAGGTAGCATTAATGAAGAGGAACAGTGAGGAA
AGAATAAGAAAACATAAAACAAGAGCAGGTTTGCAAAGTAAAAGGATGATTTTTGAAGTT
TTTAAATGAGTAATTTGGGATTTATTTCCATTTTTATTCATATTGCTATCTACAGAAATC
CCTTAACACCAGAAAGAGATTTGACCCCACATTTTGATGTGTATAATGTTGCTTGTGTTT
CAAGCCCTCTTAATCTTGTTGTTGCTCATTTTACTTATATATTGCCATGATTGGGTGGGA
GAGGGTCTAGAAAATTCAGCATAACTTTAATAGAATTATGTTCAATTCATAGCCCTTCAC
TTATCATAAATGTGTTTTAGAAAACCCATTTACAAGAAAGAATGCTATAAAGATGCACCT
TGCCATTTGTGATAGATGTATTCCTAGAAATATCTGTGTAAATAAATCTATTAACTTCAG
AAAGGAACAAGCTATGTAAAAAAAAATGGTGGTGAATTATTTTGTAAAATGATGAATTAT
TTTTTAAAGTAATAATCTTCCTCAAACTGTAACTGTTTCATAAGTTGGATATTTGTATAT
CAAAATTTCTTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               27-612, gnl|bosTau2|chr12 (12829557-12830168)
               

               
               27-612, gnl|Hg17|chr13 (37106457-37105876)
               

               
               27-612, gnl|Mm7|chr3 (54449879-54450421)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               27-612, gnl|bosTau2|chr12 (12829557-12830168)
               

               
               27-612, gnl|Hg17|chr13 (37106457-37105876)
               

               
               27-612, gnl|Mm7|chr3 (54449879-54450421)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fco (0.157208)
               

               
               lin (0.145603)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.157208)
               

               
               lin (0.145603)

	27-612, gnl\|bosTau2\|chr12 (12829557-12830168)
	27-612, gnl\|Hg17\|chr13 (37106457-37105876)
	27-612, gnl\|Mm7\|chr3 (54449879-54450421)