Non-Coding RNA Search

Ss1.1-rpfco0104_m14.5

Sequence:


               
               GTGATTTCTTAAACTCTGCAGCTTTAAAAAAAGATTTAAAGCTATCTAAAATCCTCTTGG
AAATAGTTAATGTCATAATATCCCAGTGTTGTGAGAATGTCATACTGAAATGTAATCCTG
AAAACTGAAACTTTTTATTTTGTTCATTGTAAATTTATGATCCTCAGGTGTACAGTAATA
TGTTGACAAATAACTGCTTATATATTTTTGAGAGTTGAGAGCAGATAGATATATACAGCA
GTAGTTCATGAAGCTATTTTTGTACTGATGAATTTTAACAACAATTTGATTACCTTAATG
GAGAATAGGCTATTTTGAGCACCAATTATATTTAAATCCTTCTAATGTTTAGATAATGTA
TTCTCATGGTGCTGCTAGAATTTATGCATTTTGGGGGTACTGCATGCATCTTCTATTCTG
TAAAGAAATTTTTCTGCCATTCTGTGTGTTTCCAACAGGTATTCATTAAAGGATGTATGT
AGAAACATTAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGATTTCTTAAACTCTGCAGCTTTAAAAAAAGATTTAAAGCTATCTAAAATCCTCTTGG
AAATAGTTAATGTCATAATATCCCAGTGTTGTGAGAATGTCATACTGAAATGTAATCCTG
AAAACTGAAACTTTTTATTTTGTTCATTGTAAATTTATGATCCTCAGGTGTACAGTAATA
TGTTGACAAATAACTGCTTATATATTTTTGAGAGTTGAGAGCAGATAGATATATACAGCA
GTAGTTCATGAAGCTATTTTTGTACTGATGAATTTTAACAACAATTTGATTACCTTAATG
GAGAATAGGCTATTTTGAGCACCAATTATATTTAAATCCTTCTAATGTTTAGATAATGTA
TTCTCATGGTGCTGCTAGAATTTATGCATTTTGGGGGTACTGCATGCATCTTCTATTCTG
TAAAGAAATTTTTCTGCCATTCTGTGTGTTTCCAACAGGTATTCATTAAAGGATGTATGT
AGAAACATTAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               30-489, gnl|bosTau2|chr10 (4553416-4553868)
               

               
               30-489, gnl|Hg17|chr5 (78765901-78765457)
               

               
               30-489, gnl|Mm7|chr13 (90422954-90423384)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               30-489, gnl|bosTau2|chr10 (4553416-4553868)
               

               
               30-489, gnl|Hg17|chr5 (78765901-78765457)
               

               
               30-489, gnl|Mm7|chr13 (90422954-90423384)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fco (0.314416)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.314416)

	30-489, gnl\|bosTau2\|chr10 (4553416-4553868)
	30-489, gnl\|Hg17\|chr5 (78765901-78765457)
	30-489, gnl\|Mm7\|chr13 (90422954-90423384)