Non-Coding RNA Search

Ss1.1-rpfco0109_b15.5

Sequence:


               
               CATTGCTGTGAGCTGGGGGTGTGGACCGCAGACGTGGCTCAGATCCTGCGTTGCTGTGGT
GTAGGCTGGCGGCTACAGCTCCCATTGGACCCCCAGCCTGGGAACAGGTGTGGCGCTAAA
AATAGATTTTTGTATGTGGACTGTGGAGCATCATCCTTGTTAAATAACCTCACTGACTGT
AATAATTTATCTGTATTCTTTTATTTTGTAAAATAATACAGATATATCATCTCTGAATAT
CCTATCAGTTTTATTTCATCCTTTCCAGTTTTATATCATTTATTTCTTTCATCTTCACTG
GCCAGGACATCCACCACCCTGTGCAAGGAAAGTGGTTTGGGTGGAAGTCTTTGAACCATT
CACAGACTTGAAGGAAAAGCTTTCACTGTTTCATCACTGAGTGTGTTGTCTGAAGTGAGA
TTCTGATTCACAGCTGTCAGATTAATAATGTGCTCTATTTGGTATTATTTGTATCATGAT
TTAGATTTTGAATGTTGTCAAATGCAGCTTCTTAATTGAAACGATCACAGCTTTTAAAAA
ATTCTGTCAGCATAGCAGGCAAAAGATTTATTTCCCTCTGTAAAATCGACCTTGAATCTT
TGGAATAAAATCAGCTTAGTTGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATTGCTGTGAGCTGGGGGTGTGGACCGCAGACGTGGCTCAGATCCTGCGTTGCTGTGGT
GTAGGCTGGCGGCTACAGCTCCCATTGGACCCCCAGCCTGGGAACAGGTGTGGCGCTAAA
AATAGATTTTTGTATGTGGACTGTGGAGCATCATCCTTGTTAAATAACCTCACTGACTGT
AATAATTTATCTGTATTCTTTTATTTTGTAAAATAATACAGATATATCATCTCTGAATAT
CCTATCAGTTTTATTTCATCCTTTCCAGTTTTATATCATTTATTTCTTTCATCTTCACTG
GCCAGGACATCCACCACCCTGTGCAAGGAAAGTGGTTTGGGTGGAAGTCTTTGAACCATT
CACAGACTTGAAGGAAAAGCTTTCACTGTTTCATCACTGAGTGTGTTGTCTGAAGTGAGA
TTCTGATTCACAGCTGTCAGATTAATAATGTGCTCTATTTGGTATTATTTGTATCATGAT
TTAGATTTTGAATGTTGTCAAATGCAGCTTCTTAATTGAAACGATCACAGCTTTTAAAAA
ATTCTGTCAGCATAGCAGGCAAAAGATTTATTTCCCTCTGTAAAATCGACCTTGAATCTT
TGGAATAAAATCAGCTTAGTTGAA

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               127-623, gnl|bosTau2|chr15 (32758632-32758135)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               127-623, gnl|bosTau2|chr15 (32758632-32758135)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               fco (0.314416)
               

               
               che (0.272628)
               

               
               fhi (0.169578)
               

               
               ssp (0.13552)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.314416)
               

               
               che (0.272628)
               

               
               fhi (0.169578)
               

               
               ssp (0.13552)