Non-Coding RNA Search

Ss1.1-rpfco0109_h1.5

Sequence:


               
               CTATTCTCCTGTGTTCTCTCATTATGGACTTTGTGAAGTGGAAACATACTTTTTTCCTCC
AAAGGTAAAAATGCATTCTTGCTTTAAAAAAAAAAGAAGGCTAAAAAAAATTACCTCTTT
TTAAATTATGTGCAAAATAATTCTGGCTAAATATGAAATGTATTCAATTTTAGGGATTTT
TTTTTTTTGTATTGTGATGCTTTATTTGTACATTTTTTTTTCCTTTCTGGATGTAATTTT
AATCTCTTGCCATTCATTAGTGTTATTTCATTGTAAACATTATTGTGCCAAATGTACTGT
ATTCAAAAGGATGTGAATGTGTATTGTTTCAGAACTTAATAAATACAATGATGTTAAATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTATTCTCCTGTGTTCTCTCATTATGGACTTTGTGAAGTGGAAACATACTTTTTTCCTCC
AAAGGTAAAAATGCATTCTTGCTTTAAAAAAAAAAGAAGGCTAAAAAAAATTACCTCTTT
TTAAATTATGTGCAAAATAATTCTGGCTAAATATGAAATGTATTCAATTTTAGGGATTTT
TTTTTTTTGTATTGTGATGCTTTATTTGTACATTTTTTTTTCCTTTCTGGATGTAATTTT
AATCTCTTGCCATTCATTAGTGTTATTTCATTGTAAACATTATTGTGCCAAATGTACTGT
ATTCAAAAGGATGTGAATGTGTATTGTTTCAGAACTTAATAAATACAATGATGTTAAATC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-360, gnl|bosTau2|chr11 (23504351-23503997)
               

               
               1-360, gnl|Hg17|chr2 (46326414-46326777)
               

               
               1-360, gnl|Mm7|chr17 (84960014-84960358)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-360, gnl|bosTau2|chr11 (23504351-23503997)
               

               
               1-360, gnl|Hg17|chr2 (46326414-46326777)
               

               
               1-360, gnl|Mm7|chr17 (84960014-84960358)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               ecc (0.23007)
               

               
               nlu (0.191681)
               

               
               fco (0.157208)
               

               
               lin (0.145603)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ecc (0.23007)
               

               
               nlu (0.191681)
               

               
               fco (0.157208)
               

               
               lin (0.145603)

	1-360, gnl\|bosTau2\|chr11 (23504351-23503997)
	1-360, gnl\|Hg17\|chr2 (46326414-46326777)
	1-360, gnl\|Mm7\|chr17 (84960014-84960358)