Non-Coding RNA Search

Ss1.1-rpfco0110_d17.5

Sequence:


               
               TTTTTTTTTTTTCTTTCTCCTGTCTCTCTCTCTTAAAGCTTCTGCTAGGCACACGGTTCA
CTAAAAATTCTGTCAGTCACAAACTGGAAGAATTTGTAAAAGGAAAAAGCATATCTCAAT
AAGTATACACGTGGCTTCACATTTATGAGATGATGAATTAGCACCAAAAGTTTCATTTAA
CCAATATTTCACAGTCAGAAACAAGCTCATGTCTTCATCTGTTGTCTGTACATTCTTGGT
TAATGTTTCTTGCATTTATTTTTATACCATATTTAAATAAGAGACACCTTTTACTCCAAA
TGTATTAAAGTTGATCCCTTCTCTGTAAATTGGTGTATGTTTATATTGTTGTTTTATCTT
TCATTAAAAGATGCATAATCTCGTCAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTCTTTCTCCTGTCTCTCTCTCTTAAAGCTTCTGCTAGGCACACGGTTCA
CTAAAAATTCTGTCAGTCACAAACTGGAAGAATTTGTAAAAGGAAAAAGCATATCTCAAT
AAGTATACACGTGGCTTCACATTTATGAGATGATGAATTAGCACCAAAAGTTTCATTTAA
CCAATATTTCACAGTCAGAAACAAGCTCATGTCTTCATCTGTTGTCTGTACATTCTTGGT
TAATGTTTCTTGCATTTATTTTTATACCATATTTAAATAAGAGACACCTTTTACTCCAAA
TGTATTAAAGTTGATCCCTTCTCTGTAAATTGGTGTATGTTTATATTGTTGTTTTATCTT
TCATTAAAAGATGCATAATCTCGTCAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               7-384, gnl|bosTau2|chr16 (20081257-20080884)
               

               
               7-384, gnl|Hg17|chr1 (237265240-237264854)
               

               
               7-384, gnl|Mm7|chr1 (175025747-175025364)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-384, gnl|bosTau2|chr16 (20081257-20080884)
               

               
               7-384, gnl|Hg17|chr1 (237265240-237264854)
               

               
               7-384, gnl|Mm7|chr1 (175025747-175025364)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               fco (0.314416)
               

               
               fce (0.271592)
               

               
               spc (0.113366)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.314416)
               

               
               fce (0.271592)
               

               
               spc (0.113366)

	7-384, gnl\|bosTau2\|chr16 (20081257-20080884)
	7-384, gnl\|Hg17\|chr1 (237265240-237264854)
	7-384, gnl\|Mm7\|chr1 (175025747-175025364)