Non-Coding RNA Search

Ss1.1-rpfco0110_d23.5

Sequence:


               
               ACTTGATGCAAATAGACTAGGAACTGAACACACACACACACACACACACACAAACTACCT
TGATTATGCAATATCTTAGCATAGAAAGTTACAAAGGTATGTCTTTTTTTAAAAAAAAAA
TCCATTCTATCATGCAAATATTATCTAAATATGCATGTGCTGACGACTCATCTACTGTAT
TTTAGGAAATACAATTAGGCTGCCTTTCTCTTCTCCTGTGTGGACTGTAAATACCTGTAG
ATCTTTCTCTTGTTTCCTTATGTAAATATATGTAAATACTAACAAGCCCTGCATGCTGAT
ATTCTAGGCAATTTCAGGTCCTTTTATAATCTGAAGGCATGTACTTGAACTGGTTTGTTA
AAAGGAAAAAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTTGATGCAAATAGACTAGGAACTGAACACACACACACACACACACACACAAACTACCT
TGATTATGCAATATCTTAGCATAGAAAGTTACAAAGGTATGTCTTTTTTTAAAAAAAAAA
TCCATTCTATCATGCAAATATTATCTAAATATGCATGTGCTGACGACTCATCTACTGTAT
TTTAGGAAATACAATTAGGCTGCCTTTCTCTTCTCCTGTGTGGACTGTAAATACCTGTAG
ATCTTTCTCTTGTTTCCTTATGTAAATATATGTAAATACTAACAAGCCCTGCATGCTGAT
ATTCTAGGCAATTTCAGGTCCTTTTATAATCTGAAGGCATGTACTTGAACTGGTTTGTTA
AAAGGAAAAAAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               36-370, gnl|bosTau2|chr18 (3177033-3177365)
               

               
               36-370, gnl|Hg17|chr16 (77794394-77794072)
               

               
               36-370, gnl|Mm7|chr8 (113955920-113955645)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               36-370, gnl|bosTau2|chr18 (3177033-3177365)
               

               
               36-370, gnl|Hg17|chr16 (77794394-77794072)
               

               
               36-370, gnl|Mm7|chr8 (113955920-113955645)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fco (0.157208)
               

               
               ebs (0.118301)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.157208)
               

               
               ebs (0.118301)

	36-370, gnl\|bosTau2\|chr18 (3177033-3177365)
	36-370, gnl\|Hg17\|chr16 (77794394-77794072)
	36-370, gnl\|Mm7\|chr8 (113955920-113955645)