Non-Coding RNA Search

Ss1.1-rpfco0111_n10.5

Sequence:


               
               AGAAGTGAGAAATATGTATTTCACTCTAAAGGAAAATTCTTTAAAAATAAATTTAATCTC
ATCAAAGTTGATTTTTAAAGTATTTTTATTTTAAAGCTATTTGTTGTTAAATACTATTTC
TTATGATAGAACTATTTTGATCTGTTTATACACTATGCTTGAAAGAATGTCAATTAAATT
CCCTTTCTTCAGAAAGGCTTTGACCTCAGTATGCTCTATTTAGCTCATCATGTTTATAAT
GACATGCTTACATCTGCATACCATCATTGTTGCTAAGAGTTAATATTCCATGAAGTTGTT
GTTACTACACAAAGTTTACTAATGAGATAATTTGAAATAACTTTGGGTTATACCTTTTAT
GAGATTTATGTTTTGTGCTGACAGTGTCTTCTTAACTGTCTACAAGTCTGGTATACCTAG
TGGATAGTAAGCATTAACACATGACTAATTTCTGTTTGTTTCATTCTATCAAATTTCAGA
TGTTTAGTTCAGTGGTAATGTTGACTGTTCACTGCATTAAAAGCATCATCTTTTTTAAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAAGTGAGAAATATGTATTTCACTCTAAAGGAAAATTCTTTAAAAATAAATTTAATCTC
ATCAAAGTTGATTTTTAAAGTATTTTTATTTTAAAGCTATTTGTTGTTAAATACTATTTC
TTATGATAGAACTATTTTGATCTGTTTATACACTATGCTTGAAAGAATGTCAATTAAATT
CCCTTTCTTCAGAAAGGCTTTGACCTCAGTATGCTCTATTTAGCTCATCATGTTTATAAT
GACATGCTTACATCTGCATACCATCATTGTTGCTAAGAGTTAATATTCCATGAAGTTGTT
GTTACTACACAAAGTTTACTAATGAGATAATTTGAAATAACTTTGGGTTATACCTTTTAT
GAGATTTATGTTTTGTGCTGACAGTGTCTTCTTAACTGTCTACAAGTCTGGTATACCTAG
TGGATAGTAAGCATTAACACATGACTAATTTCTGTTTGTTTCATTCTATCAAATTTCAGA
TGTTTAGTTCAGTGGTAATGTTGACTGTTCACTGCATTAAAAGCATCATCTTTTTTAAGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               8-539, gnl|bosTau2|chr7 (58541782-58541238)
               

               
               8-539, gnl|Hg17|chr5 (94067558-94067000)
               

               
               8-539, gnl|Mm7|chr13 (74044953-74045490)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               8-539, gnl|bosTau2|chr7 (58541782-58541238)
               

               
               8-539, gnl|Hg17|chr5 (94067558-94067000)
               

               
               8-539, gnl|Mm7|chr13 (74044953-74045490)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fco (0.157208)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.157208)

	8-539, gnl\|bosTau2\|chr7 (58541782-58541238)
	8-539, gnl\|Hg17\|chr5 (94067558-94067000)
	8-539, gnl\|Mm7\|chr13 (74044953-74045490)