Non-Coding RNA Search

Ss1.1-rpfco0113_e13.5

Sequence:


               
               GAATTTGGTCATTGTGTTCCTTTGCAGCGCAAGTGTCTTGTGCTTCGTCAAGTGTCCATT
TGTTTCCTCCATTTCAGCCCACCCCCCTCCTCCCCTTCCAACCCAAAGGAAAGTGACAAA
GTTCTGTTCCATCAATCTGGCTAATCCCAAACTAGGCCCATTTAGAATTTGCAGGATCCT
GTGGCTCCCATCCGTTGTCAGAGCCACCATCAGCTCATTCACCAACCACCTTCCCCTGCA
ACTGGGCGATAAATCATTCAAGGTGTATTTAAAATAGTCACTTTGCTGTTGTTGCTCTGC
CTTTTTTTTCTTTTTAAGTACTTAGCCAAGGACTACTTCTTTGTTCCAAAACAGAACTAT
TCATTATTGATCTTAGAGATTCCCTCTGCTTCTCTGTAGCCTCCAGTGTTTGCTCATTAC
CATGCTCATAATCTGTTTTGTATGACTGGTTTTCCACATTCAGAGAATAATTGGTTCTAA
TATTAAATGCAGTATATGCTATTGATAGTTTTTATCAATAAGTGTAATATTTTAAATAAT
TTTAACAATTAAATTTGTTTTTTAAATTATATATTTGTAAAGTATTTATCCTGTTGGAAG
CAACAATATATTGTTGTATTTATTCGTTTATTTTTGTAATAAATGATCAACCTCTAAAAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAATTTGGTCATTGTGTTCCTTTGCAGCGCAAGTGTCTTGTGCTTCGTCAAGTGTCCATT
TGTTTCCTCCATTTCAGCCCACCCCCCTCCTCCCCTTCCAACCCAAAGGAAAGTGACAAA
GTTCTGTTCCATCAATCTGGCTAATCCCAAACTAGGCCCATTTAGAATTTGCAGGATCCT
GTGGCTCCCATCCGTTGTCAGAGCCACCATCAGCTCATTCACCAACCACCTTCCCCTGCA
ACTGGGCGATAAATCATTCAAGGTGTATTTAAAATAGTCACTTTGCTGTTGTTGCTCTGC
CTTTTTTTTCTTTTTAAGTACTTAGCCAAGGACTACTTCTTTGTTCCAAAACAGAACTAT
TCATTATTGATCTTAGAGATTCCCTCTGCTTCTCTGTAGCCTCCAGTGTTTGCTCATTAC
CATGCTCATAATCTGTTTTGTATGACTGGTTTTCCACATTCAGAGAATAATTGGTTCTAA
TATTAAATGCAGTATATGCTATTGATAGTTTTTATCAATAAGTGTAATATTTTAAATAAT
TTTAACAATTAAATTTGTTTTTTAAATTATATATTTGTAAAGTATTTATCCTGTTGGAAG
CAACAATATATTGTTGTATTTATTCGTTTATTTTTGTAATAAATGATCAACCTCTAAAAA
AAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-672, gnl|bosTau2|chr11 (6554831-6555506)
               

               
               1-672, gnl|Hg17|chr2 (104935429-104936111)
               

               
               1-672, gnl|Mm7|chr1 (42942638-42943355)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-672, gnl|bosTau2|chr11 (6554831-6555506)
               

               
               1-672, gnl|Hg17|chr2 (104935429-104936111)
               

               
               1-672, gnl|Mm7|chr1 (42942638-42943355)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               fco (0.157208)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.157208)

	1-672, gnl\|bosTau2\|chr11 (6554831-6555506)
	1-672, gnl\|Hg17\|chr2 (104935429-104936111)
	1-672, gnl\|Mm7\|chr1 (42942638-42943355)