Non-Coding RNA Search

Ss1.1-rpfco0118_e4.5

Sequence:


               
               CTTTTTTTAGACTGGTTGTCATAGTTTCCTCAAATGGCAAGATCATCGTGCTAGCCTCCT
AATTTCCCTCATTATGTTGTAACCAGTATTATTCATTGAGCCATGGGGTAGTGTTTAACT
CCTTGCTTCAATCTGTTTTGTCACTCATAAACCACTTTTGCTGGCAAAAATTAATTATAA
TAATGATTTTGCAGTTATCTGAGACACCAAACTTATCATTCTTTACCAAACTTCCCAATG
TTTTTGAAAGACCAAATAGAACCTATTAATCCACCGGGTTTAGATTATATCTTTACCTTC
AAGTTTGGCATTCAAATTTATTTAAAACTGTGTCAAACTTCTATCTAATGGTCAGTTAGA
AATAAAAGCTTGAAAATCTTTCTAACTTTTATCTAATGAGTTAATGATATTTTTGGACCA
TCTCCTAATCATAATGAGTTAAAAAAATACTTTCAAAATCACTAATATAAATTTTTTTCC
TAAAGTTGTGGATTTATCAAATTTTCATGTTTTAAAATGTCAATACTCTTATTCTTAAGA
AGCTTCTTTCAGATATAACAGCTTTCTTTCATTGCACATTAAGATACATATTTTCAAGTT
ATTGGTGGCTCATTTACAACTCTATCACAGTATGGCCAGCATTTTGATTTAATATGTTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTTTTTAGACTGGTTGTCATAGTTTCCTCAAATGGCAAGATCATCGTGCTAGCCTCCT
AATTTCCCTCATTATGTTGTAACCAGTATTATTCATTGAGCCATGGGGTAGTGTTTAACT
CCTTGCTTCAATCTGTTTTGTCACTCATAAACCACTTTTGCTGGCAAAAATTAATTATAA
TAATGATTTTGCAGTTATCTGAGACACCAAACTTATCATTCTTTACCAAACTTCCCAATG
TTTTTGAAAGACCAAATAGAACCTATTAATCCACCGGGTTTAGATTATATCTTTACCTTC
AAGTTTGGCATTCAAATTTATTTAAAACTGTGTCAAACTTCTATCTAATGGTCAGTTAGA
AATAAAAGCTTGAAAATCTTTCTAACTTTTATCTAATGAGTTAATGATATTTTTGGACCA
TCTCCTAATCATAATGAGTTAAAAAAATACTTTCAAAATCACTAATATAAATTTTTTTCC
TAAAGTTGTGGATTTATCAAATTTTCATGTTTTAAAATGTCAATACTCTTATTCTTAAGA
AGCTTCTTTCAGATATAACAGCTTTCTTTCATTGCACATTAAGATACATATTTTCAAGTT
ATTGGTGGCTCATTTACAACTCTATCACAGTATGGCCAGCATTTTGATTTAATATGTTGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-657, gnl|bosTau2|chr25 (34337208-34337864)
               

               
               1-657, gnl|Hg17|chr8 (113305552-113304873)
               

               
               1-657, gnl|Mm7|chr15 (47634822-47634171)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-657, gnl|bosTau2|chr25 (34337208-34337864)
               

               
               1-657, gnl|Hg17|chr8 (113305552-113304873)
               

               
               1-657, gnl|Mm7|chr15 (47634822-47634171)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fco (0.157208)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.157208)

	1-657, gnl\|bosTau2\|chr25 (34337208-34337864)
	1-657, gnl\|Hg17\|chr8 (113305552-113304873)
	1-657, gnl\|Mm7\|chr15 (47634822-47634171)