Non-Coding RNA Search

Ss1.1-rpfco0118_j11.5

Sequence:


               
               TAAAAGGTAGGCAGATGCTTGGAATGAATTATATGGTATATTCACATGGATCCCTAAACA
TTACTTTATATAATAAGGTAATACCAGGACTATATCTACAGGTCGCTTTTGTTAAGAGCC
ACATTCATGCATTTTCACTTTTTTGAACTCTTGTACCTTTACACTTGTACTCCAGATGTG
AAGACCACATTTCTGAATGGCTAAGCCTATGATTATATTTTGGTTATATGCTGCTCTTTT
GCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCTCCTCTATGAATAATTTTGTATTTT
ATGCTACTTCTTGAAAATGTATTCTTTGATGCTGTAAAAGAATAACCGGATGGTTTCTAC
ACACAATCTCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAAAAGGTAGGCAGATGCTTGGAATGAATTATATGGTATATTCACATGGATCCCTAAACA
TTACTTTATATAATAAGGTAATACCAGGACTATATCTACAGGTCGCTTTTGTTAAGAGCC
ACATTCATGCATTTTCACTTTTTTGAACTCTTGTACCTTTACACTTGTACTCCAGATGTG
AAGACCACATTTCTGAATGGCTAAGCCTATGATTATATTTTGGTTATATGCTGCTCTTTT
GCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCTCCTCTATGAATAATTTTGTATTTT
ATGCTACTTCTTGAAAATGTATTCTTTGATGCTGTAAAAGAATAACCGGATGGTTTCTAC
ACACAATCTCTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               9-372, gnl|bosTau2|chr2 (33663437-33663803)
               

               
               9-372, gnl|Hg17|chr2 (149707386-149707732)
               

               
               9-372, gnl|Mm7|chr2 (49780716-49781061)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-372, gnl|bosTau2|chr2 (33663437-33663803)
               

               
               9-372, gnl|Hg17|chr2 (149707386-149707732)
               

               
               9-372, gnl|Mm7|chr2 (49780716-49781061)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fco (0.157208)
               

               
               spl (0.143184)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.157208)
               

               
               spl (0.143184)

	9-372, gnl\|bosTau2\|chr2 (33663437-33663803)
	9-372, gnl\|Hg17\|chr2 (149707386-149707732)
	9-372, gnl\|Mm7\|chr2 (49780716-49781061)