Ss1.1-rpfco0118_k3.5.5
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TTGCGGCGGCGGCTGGACTTGCAAGGCGCGATCCTAGAGGGATTTAAGCAGCCTGGAGCT
CCGGAGACAAAAAGAGCGCGAGAGAACCACACACAGAGCCGGCTTAACCGTTTATCCGAA
TTAAATATATACACATATAGTTATTTCTAAAGAACTGTTGAGTTTTATCATTGTCGTTAA
GTGACCGTGCGCAGCGCTATAACTGCAAAATGGGGAAACAGAATAGCAAACTGGCCCCTG
AAGTGATGGAGGACCTGGTGAAGAGCACAGAGTTTAATGAGCATGAACTCAAGCAATGGT
ACAAAGGGTTTCTCAAGGACTGTCCAAGCGGGAGGCTGAATCTCGAGGAATTTCAGCAGC
TCTATGTGAAGTTCTTCCCGTATGGAGATGCCTCCAAGTTTGCCCAGCACGCCTTCCGAA
CCTTTGACAAGAACGGGGACGGCACCATCGACTTCCGAGAGTTCATCTGCGCCCTGTCCA
TCACCTCCAGGGGCAGCTTTGAGCAGAAGCTGAACTGGGCCTTCAACATGTACGACCTGG
ACGGTGACGGCAAGATCACGCGGGTGGAGATGCTGGAGATCATCGAGGCCATCTACAAAA
TGGTGGGCACCGTGATCATGATGAAAATGAATGAGGATGGCCTCACGCCCGAGCAGCGAG
TAGACAAGATTTTCAGCAAGATGGATAAGAACAAAGACGACCAGATCACCCTGGATGAAT
TCAAAGAAGCTGCGAAGAGCGACCCTTCCATCGTATTACTTCTGCAGTGCGACATTCAGA
AATGAGCGAGGGTCAACGTTACGGACTGCACAAAAGTCTCAATGTTCCATTCAGTCTGCA
GCTATTCACACACACACACACACACTATTGCTTGGACTACCTATAAATGGACTTGCTTCT
TGTGTTTGAAACACTTGTGTGCATGAGAATGTCATTTGCTAATGAATTTTAAAAAGCATA
TATTATAAAACAAACCAGCCACAATGTGATATGTGTAATATCATTTCATAAAAAACAAAA
AACAAAAAACCTTCCTCCTCCAAAGCCTGGGCAGAAATGTGCTGCAAAGAGTTATATGAT
TTCTTGTTTATGTTTTGCTAATGCTCGTGTCTCCTTGATTACATGGTGTTAGTAGCACTG
AGATTCCCCCACAGTAATGTAACTGAATTAGAAGCTGTGTCACCATCTCCTGTAAAATAG
TACTGGACACACACACAGAGCGGCCCTTGGCTCCTTGGTGTGGTCCCCACACAAGAGCTT
GTATTCCCAGTGAATAGAAATGTACAACATTTGCATGCCTTTTAGGTTTGCCTTAATTCT
TACCTCATTTGCATCCTATCAATCTGGAAAGAGCTGTGTTGGAATTAATGTAGTGTAAAA
CTTAAAAACCCTGCTAAATGACTCATTAATTAAGCATATCTATCTATATATACATATACA
CAAAGATATTATTTATTGAAAGTAAAAAAAAAAAAGATGGATGTGTATTGATTTCTGCTT
GAATTTTCAAAGGCTTCCAAAGAAGTGGCAATAGATGTCCCAAATAAATTTATAACATTT
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTGCGGCGGCGGCTGGACTTGCAAGGCGCGATCCTAGAGGGATTTAAGCAGCCTGGAGCT
CCGGAGACAAAAAGAGCGCGAGAGAACCACACACAGAGCCGGCTTAACCGTTTATCCGAA
TTAAATATATACACATATAGTTATTTCTAAAGAACTGTTGAGTTTTATCATTGTCGTTAA
GTGACCGTGCGCAGCGCTATAACTGCAAAATGGGGAAACAGAATAGCAAACTGGCCCCTG
AAGTGATGGAGGACCTGGTGAAGAGCACAGAGTTTAATGAGCATGAACTCAAGCAATGGT
ACAAAGGGTTTCTCAAGGACTGTCCAAGCGGGAGGCTGAATCTCGAGGAATTTCAGCAGC
TCTATGTGAAGTTCTTCCCGTATGGAGATGCCTCCAAGTTTGCCCAGCACGCCTTCCGAA
CCTTTGACAAGAACGGGGACGGCACCATCGACTTCCGAGAGTTCATCTGCGCCCTGTCCA
TCACCTCCAGGGGCAGCTTTGAGCAGAAGCTGAACTGGGCCTTCAACATGTACGACCTGG
ACGGTGACGGCAAGATCACGCGGGTGGAGATGCTGGAGATCATCGAGGCCATCTACAAAA
TGGTGGGCACCGTGATCATGATGAAAATGAATGAGGATGGCCTCACGCCCGAGCAGCGAG
TAGACAAGATTTTCAGCAAGATGGATAAGAACAAAGACGACCAGATCACCCTGGATGAAT
TCAAAGAAGCTGCGAAGAGCGACCCTTCCATCGTATTACTTCTGCAGTGCGACATTCAGA
AATGAGCGAGGGTCAACGTTACGGACTGCACAAAAGTCTCAATGTTCCATTCAGTCTGCA
GCTATTCACACACACACACACACACTATTGCTTGGACTACCTATAAATGGACTTGCTTCT
TGTGTTTGAAACACTTGTGTGCATGAGAATGTCATTTGCTAATGAATTTTAAAAAGCATA
TATTATAAAACAAACCAGCCACAATGTGATATGTGTAATATCATTTCATAAAAAACAAAA
AACAAAAAACCTTCCTCCTCCAAAGCCTGGGCAGAAATGTGCTGCAAAGAGTTATATGAT
TTCTTGTTTATGTTTTGCTAATGCTCGTGTCTCCTTGATTACATGGTGTTAGTAGCACTG
AGATTCCCCCACAGTAATGTAACTGAATTAGAAGCTGTGTCACCATCTCCTGTAAAATAG
TACTGGACACACACACAGAGCGGCCCTTGGCTCCTTGGTGTGGTCCCCACACAAGAGCTT
GTATTCCCAGTGAATAGAAATGTACAACATTTGCATGCCTTTTAGGTTTGCCTTAATTCT
TACCTCATTTGCATCCTATCAATCTGGAAAGAGCTGTGTTGGAATTAATGTAGTGTAAAA
CTTAAAAACCCTGCTAAATGACTCATTAATTAAGCATATCTATCTATATATACATATACA
CAAAGATATTATTTATTGAAAGTAAAAAAAAAAAAGATGGATGTGTATTGATTTCTGCTT
GAATTTTCAAAGGCTTCCAAAGAAGTGGCAATAGATGTCCCAAATAAATTTATAACATTT
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
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gi|45383948|ref|NP_990586.1| |
Protein identifier
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gi|45383948|ref|NP_990586.1| |
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210-588, gnl|bosTau2|chr11 (66633662-66634040) |
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210-588, gnl|canFam2|chr17 (10325810-10326095) |
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210-588, gnl|danRer3|chr20 (34015670-34015955) |
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210-588, gnl|dasNov1|scaffold_41367 (1006-1291) |
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210-588, gnl|echTel1|scaffold_293348 (53086-52800) |
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210-588, gnl|fr1|chrUn (20927361-20927076) |
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210-588, gnl|galGal2|chr3 (95026095-95026380) |
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210-588, gnl|hg17|chr2 (10510577-10510862) |
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210-588, gnl|Hg17|chr2 (10510482-10510860) |
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210-588, gnl|loxAfr1|scaffold_18037 (68768-68483) |
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210-588, gnl|mm7|chr12 (19177870-19177588) |
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210-588, gnl|Mm7|chr12 (17836490-17836868) |
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210-588, gnl|monDom2|scaffold_1 (129082407-129082692) |
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210-588, gnl|oryCun1|scaffold_177563 (6691-6976) |
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210-588, gnl|panTro1|chr12 (11246293-11246578) |
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210-588, gnl|rheMac2|chr13 (10509592-10509877) |
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210-588, gnl|rn3|chr6 (41572924-41573209) |
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210-588, gnl|tetNig1|chr21 (1641443-1641728) |
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210-588, gnl|xenTro1|scaffold_636 (306571-306286) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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210-588, gnl|bosTau2|chr11 (66633662-66634040) |
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210-588, gnl|canFam2|chr17 (10325810-10326095) |
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210-588, gnl|danRer3|chr20 (34015670-34015955) |
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210-588, gnl|dasNov1|scaffold_41367 (1006-1291) |
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210-588, gnl|echTel1|scaffold_293348 (53086-52800) |
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210-588, gnl|fr1|chrUn (20927361-20927076) |
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210-588, gnl|galGal2|chr3 (95026095-95026380) |
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210-588, gnl|hg17|chr2 (10510577-10510862) |
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210-588, gnl|Hg17|chr2 (10510482-10510860) |
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210-588, gnl|loxAfr1|scaffold_18037 (68768-68483) |
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210-588, gnl|mm7|chr12 (19177870-19177588) |
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210-588, gnl|Mm7|chr12 (17836490-17836868) |
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210-588, gnl|monDom2|scaffold_1 (129082407-129082692) |
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210-588, gnl|oryCun1|scaffold_177563 (6691-6976) |
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210-588, gnl|panTro1|chr12 (11246293-11246578) |
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210-588, gnl|rheMac2|chr13 (10509592-10509877) |
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210-588, gnl|rn3|chr6 (41572924-41573209) |
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210-588, gnl|tetNig1|chr21 (1641443-1641728) |
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210-588, gnl|xenTro1|scaffold_636 (306571-306286) |
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cbe (8.37321) |
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fco (3.14416) |
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fcc (1.38449) |
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spc (1.36039) |
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ebs (0.591506) |
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rec (0.519211) |
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hyp (0.42851) |
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ece (0.229305) |
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fbs (0.175346) |
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fhi (0.169578) |
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ski (0.146735) |
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lin (0.145603) |
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ret (0.128733) |
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cbr (0.127975) |
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sug (0.127291) |
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tra (0.123092) |
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ecc (0.115035) |
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cbe (8.37321) |
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fco (3.14416) |
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fcc (1.38449) |
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spc (1.36039) |
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ebs (0.591506) |
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rec (0.519211) |
|
hyp (0.42851) |
|
ece (0.229305) |
|
fbs (0.175346) |
|
fhi (0.169578) |
|
ski (0.146735) |
|
lin (0.145603) |
|
ret (0.128733) |
|
cbr (0.127975) |
|
sug (0.127291) |
|
tra (0.123092) |
|
ecc (0.115035) |
