Ss1.1-rpfco0120_j19.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGAGATTTAACATAGGTTTTCTTTCTGTATTATAAAAACACCAAGAAATTATGGTGGACC TATTACCCTATGGGTAAGAAATAAATGGAAATATGACATCGGATGTTTTAGCAATTGTTC TGTAAATAAAATCTTTGATCACACCACTTTAGTGTGATAATCATGTCTACAGCTAAAATG GAAATAGTTTTATCTGTACAGTTGTGCAAGATATGAATGGTTTCACACTCAAATAAAAAG CATTGAAATGACAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGAGATTTAACATAGGTTTTCTTTCTGTATTATAAAAACACCAAGAAATTATGGTGGACC TATTACCCTATGGGTAAGAAATAAATGGAAATATGACATCGGATGTTTTAGCAATTGTTC TGTAAATAAAATCTTTGATCACACCACTTTAGTGTGATAATCATGTCTACAGCTAAAATG GAAATAGTTTTATCTGTACAGTTGTGCAAGATATGAATGGTTTCACACTCAAATAAAAAG CATTGAAATGACAAAAAAAAAAAA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 119-252, + strand, RNAz p=0.90519 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 119-252, + strand, RNAz p=0.90519 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 3' of NM_032491, + |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 1-252, gnl|bosTau2|chr5 (41053411-41053162) | |
| 1-252, gnl|Hg17|chr12 (105658799-105659049) | |
| 1-252, gnl|Mm7|chr10 (84447650-84447900) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-252, gnl|bosTau2|chr5 (41053411-41053162) | |
| 1-252, gnl|Hg17|chr12 (105658799-105659049) | |
| 1-252, gnl|Mm7|chr10 (84447650-84447900) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fco (0.157208) |