Non-Coding RNA Search

Ss1.1-rpfco0121_a2.5

Sequence:


               
               GGACGCCCTCGCAAGGTGCTGGACCCTCCCCTAAAATGTCTACCTAACTACCACTAAGGA
AGTTCTCACTTGGAACCTGCTAACGTCTTCCCTGATTTTTATCTTACCATCCTACGTCTT
CTTAACAGGAGCCTGAGCTACAAGGGTTACTGAGGACCCGCGACTTTAAACGTAAATGAG
TGTGTGTATATGTGTCTATGCATGCTTGTATGAATCTCCATGACGTTTGCCAAGTTTGGG
CACCAAAACTTGGAAAATAAAGACAATAAAGAATAAAAGTAGTGACTCAAAATAGTTGTT
GAAATAGATAAGTTAAAAAAAAAAAAGCAGTCTGGTATCTATTCTCGTTACAATAAAAGA
TTTGTAAAATTGGCTTAAAAAGCAAATTTCTAGTTAACATTTCTGATATTGTTTGTGAAG
AATATTGTTCTACTGGGTTAAAAAAAAATACAAATGCATTAGCCTTTATTAATCTAAACC
TAAACACCAAAACTATGTGCATGACCACAATCCTCTAAATATAAAGCTACCTCACTTTGT
TTAAAGGACAAATTAGTTAAGACCATAACTCTGCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGACGCCCTCGCAAGGTGCTGGACCCTCCCCTAAAATGTCTACCTAACTACCACTAAGGA
AGTTCTCACTTGGAACCTGCTAACGTCTTCCCTGATTTTTATCTTACCATCCTACGTCTT
CTTAACAGGAGCCTGAGCTACAAGGGTTACTGAGGACCCGCGACTTTAAACGTAAATGAG
TGTGTGTATATGTGTCTATGCATGCTTGTATGAATCTCCATGACGTTTGCCAAGTTTGGG
CACCAAAACTTGGAAAATAAAGACAATAAAGAATAAAAGTAGTGACTCAAAATAGTTGTT
GAAATAGATAAGTTAAAAAAAAAAAAGCAGTCTGGTATCTATTCTCGTTACAATAAAAGA
TTTGTAAAATTGGCTTAAAAAGCAAATTTCTAGTTAACATTTCTGATATTGTTTGTGAAG
AATATTGTTCTACTGGGTTAAAAAAAAATACAAATGCATTAGCCTTTATTAATCTAAACC
TAAACACCAAAACTATGTGCATGACCACAATCCTCTAAATATAAAGCTACCTCACTTTGT
TTAAAGGACAAATTAGTTAAGACCATAACTCTGCTG

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               11-423, gnl|bosTau2|chr1 (58211466-58211057)
               

               
               11-423, gnl|Hg17|chr3 (134802471-134802088)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-423, gnl|bosTau2|chr1 (58211466-58211057)
               

               
               11-423, gnl|Hg17|chr3 (134802471-134802088)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fco (0.157208)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.157208)

	11-423, gnl\|bosTau2\|chr1 (58211466-58211057)
	11-423, gnl\|Hg17\|chr3 (134802471-134802088)