Ss1.1-rpfco0122_a13.5.5
|
TTTTTTTTTTTTTTTTTTTTTTAGCAAGTAAAACTTTTATTAAATAAACTTTCAGTTTCT
CCAGACCAAAGAGAGGCGTTTGGGACATGAAGATGATGTCTGCAGCTTCTCACCTGAAAC
ACGCCACCGTGACAAGGACCTCGAGGCTCAAACAAGTCAACCCGAAGTTCCCTCCAAGTC
TTTTTCTTGTCTTTCTTTGTGTGTGTGTGCGTGTATGTATGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGGCGGTTTGTCTCCAAAAGTCAGTTTGCAAGTTGAAACTT
CATGAAATTACTCGTAGCAGAAATAAAGTACATCGTACAAATCACGTAGGTCTTTGACGT
GGAGTATAAAAATGGTATTTACAGCCAGTAAACATGGACCAGAGGATACACGCCACTGCA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTTTTTTTTTTTTTTTTTTTTTAGCAAGTAAAACTTTTATTAAATAAACTTTCAGTTTCT
CCAGACCAAAGAGAGGCGTTTGGGACATGAAGATGATGTCTGCAGCTTCTCACCTGAAAC
ACGCCACCGTGACAAGGACCTCGAGGCTCAAACAAGTCAACCCGAAGTTCCCTCCAAGTC
TTTTTCTTGTCTTTCTTTGTGTGTGTGTGCGTGTATGTATGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGGCGGTTTGTCTCCAAAAGTCAGTTTGCAAGTTGAAACTT
CATGAAATTACTCGTAGCAGAAATAAAGTACATCGTACAAATCACGTAGGTCTTTGACGT
GGAGTATAAAAATGGTATTTACAGCCAGTAAACATGGACCAGAGGATACACGCCACTGCA |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
20-214, gnl|bosTau2|chr7 (16128048-16127853) |
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20-214, gnl|canFam2|chr20 (59092547-59092261) |
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20-214, gnl|echTel1|scaffold_294799 (6492-6764) |
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20-214, gnl|hg17|chr19 (3247751-3247999) |
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20-214, gnl|Hg17|chr19 (3248074-3247844) |
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20-214, gnl|loxAfr1|scaffold_55757 (4591-4309) |
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20-214, gnl|mm7|chr10 (81251074-81250885) |
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20-214, gnl|monDom2|scaffold_209 (401828-402059) |
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20-214, gnl|panTro1|chr20_random (10782021-10781773) |
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20-214, gnl|rheMac2|chr19 (3157710-3157960) |
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20-214, gnl|rn3|chr7 (9735565-9735738) |
| |
|
240-420, gnl|bosTau2|chr7 (16127873-16127692) |
|
240-420, gnl|Hg17|chr19 (3247856-3247686) |
|
240-420, gnl|Mm7|chr10 (81250979-81251138) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
20-214, gnl|bosTau2|chr7 (16128048-16127853) |
|
20-214, gnl|canFam2|chr20 (59092547-59092261) |
|
20-214, gnl|echTel1|scaffold_294799 (6492-6764) |
|
20-214, gnl|hg17|chr19 (3247751-3247999) |
|
20-214, gnl|Hg17|chr19 (3248074-3247844) |
|
20-214, gnl|loxAfr1|scaffold_55757 (4591-4309) |
|
20-214, gnl|mm7|chr10 (81251074-81250885) |
|
20-214, gnl|monDom2|scaffold_209 (401828-402059) |
|
20-214, gnl|panTro1|chr20_random (10782021-10781773) |
|
20-214, gnl|rheMac2|chr19 (3157710-3157960) |
|
20-214, gnl|rn3|chr7 (9735565-9735738) |
| |
|
240-420, gnl|bosTau2|chr7 (16127873-16127692) |
|
240-420, gnl|Hg17|chr19 (3247856-3247686) |
|
240-420, gnl|Mm7|chr10 (81250979-81251138) |
|
fco (0.314416) |
|
cbe (0.239234) |
|
fco (0.314416) |
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cbe (0.239234) |