Non-Coding RNA Search

Ss1.1-rpfco0122_c21.5

Sequence:


               
               TTGGTTCTGTTGTGTTTTAAGGCAGCTGGGGTGAGGGCTTCTCCTGCAGCTGCCTTGGGC
ACCAGGTACACCCTTTTCTTTGGCACTGCCATTCTTTTTGTCTCCAGCACAAATCCAGTG
TTCAGGTGAGCCAGAGGTGGGAAGAGCCATTTTCGTCTTCATAGCTGTGGGCCAGGAGAG
AGAATGAGCTGATGGTCTATTTTAACCTTGAAAGTAAAAATGTATATTTTTTCACTACAG
GTACATTGAACAGTAAAATGAGTACCAGCAAAGTATATATTTGATGCCTTCTGTCTTTTC
ATGATAATGTGCTAACAAGTCGTGTTAGTGTTTTACTCAGCCATTCGTTTGCTAAGCATT
GGGAACTGTATGTACATTGATCTTAAACCTAAATAAATATGGGGTGTCCTATATTTGGAT
TGTGACTTGTAAACTCAAGCTGACCTTCCTGCCTCTCTTTCACACTTGTTGCAAAAGTCT
GTGGAGAACATAGTAGCTTAAGAATCGCCAACGTTGGAAAATGTACATGCTGTGAAACTG
GGGTGCTATGTGAACAAATAAATATATGATAACTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGGTTCTGTTGTGTTTTAAGGCAGCTGGGGTGAGGGCTTCTCCTGCAGCTGCCTTGGGC
ACCAGGTACACCCTTTTCTTTGGCACTGCCATTCTTTTTGTCTCCAGCACAAATCCAGTG
TTCAGGTGAGCCAGAGGTGGGAAGAGCCATTTTCGTCTTCATAGCTGTGGGCCAGGAGAG
AGAATGAGCTGATGGTCTATTTTAACCTTGAAAGTAAAAATGTATATTTTTTCACTACAG
GTACATTGAACAGTAAAATGAGTACCAGCAAAGTATATATTTGATGCCTTCTGTCTTTTC
ATGATAATGTGCTAACAAGTCGTGTTAGTGTTTTACTCAGCCATTCGTTTGCTAAGCATT
GGGAACTGTATGTACATTGATCTTAAACCTAAATAAATATGGGGTGTCCTATATTTGGAT
TGTGACTTGTAAACTCAAGCTGACCTTCCTGCCTCTCTTTCACACTTGTTGCAAAAGTCT
GTGGAGAACATAGTAGCTTAAGAATCGCCAACGTTGGAAAATGTACATGCTGTGAAACTG
GGGTGCTATGTGAACAAATAAATATATGATAACTAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               19-576, gnl|bosTau2|chr18 (51220379-51219816)
               

               
               19-576, gnl|Hg17|chrX (16930504-16931052)
               

               
               19-576, gnl|Mm7|chrX (157186897-157186319)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               19-576, gnl|bosTau2|chr18 (51220379-51219816)
               

               
               19-576, gnl|Hg17|chrX (16930504-16931052)
               

               
               19-576, gnl|Mm7|chrX (157186897-157186319)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fco (0.471624)
               

               
               hyp (0.142837)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.471624)
               

               
               hyp (0.142837)

	19-576, gnl\|bosTau2\|chr18 (51220379-51219816)
	19-576, gnl\|Hg17\|chrX (16930504-16931052)
	19-576, gnl\|Mm7\|chrX (157186897-157186319)