Non-Coding RNA Search

Ss1.1-rpfco0129_l4.5

Sequence:


               
               GTGTCTATATATTTAACATTTGTAATACTGATTATGTAGAGACAATTTGAAAGTCTTATT
ACATGAATTAATTTTGTTTTTTGTTGTTGAATAAGTATATTAATATGTAATGACCCATTT
GTCTAATGAGGGAGCTAGCCACCAGACTGCTCTGTTTTTCTCTATTCATTGTTATATTTA
TAGAAACTCATTTAAATCTCTGAAGAGATCACTTACATTTTTAGTTAATAAATTATGCTT
ATTAGTTCGGGTATAAAATATTATGGTAGAGTGGTTTTCATAAATTTAAGATCTTTTACT
TGAGTACATATTCATTGTAAAAACTGTGTAAGTAAAAAAAATCCAAATCTTACCACCTGT
GGATAATCACTGTTAATATTTTGGTATATTTTCTTTTAGTACTTTTTCTTACATATTTTT
CAGCTTTATTAAGATCATGATATATTTATAAATTTGTGTCTCCTCAATTAACATTTTCTT
CATTTATTAAATGTTTATAGATAATATTTTTAATGTATGCATGGTAGTCCATAGTGTAGC
TATACCGTAATTTATTTTACCACTCTTCTCTCTTGGATATTTAGGTTGTGTAAACATTTT
AACAAATAAAATTAATTCTCTGATGAAAAAAAAAAAGCAAAAGCTTGTTCTGTGTTTTAC
ATTATTTCATCTTTTTATTCTTAGAAATGAAATTGCTTGGTCAAAGATTGTACATACTTC
TGAGGCTTAATACATATTGTCAAATTGCTCTTTAGAAAATACTTTTCTAAAATTTATTTT
TCTTCTCTATTGTCATGAACACCGTCTTTCAGGGAATTATGAATGGTAGTTATATTTGAA
GTTTAAATTCAAGTTATAATTTAACTCAACAGTGAACACTACTTTGTAAAATGAAGTATA
TGAGAAGACTGTATCAAGAACAGGATTAGATCTTTATTTGAAATGGAAGTGCACTGGGTT
TCACCAATGGGTATTTCCTCTGTTCCCCTAATTTCCAGAGTTGAAGCTCTTTGGCAGTCT
CACAGGTCATGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGTCTATATATTTAACATTTGTAATACTGATTATGTAGAGACAATTTGAAAGTCTTATT
ACATGAATTAATTTTGTTTTTTGTTGTTGAATAAGTATATTAATATGTAATGACCCATTT
GTCTAATGAGGGAGCTAGCCACCAGACTGCTCTGTTTTTCTCTATTCATTGTTATATTTA
TAGAAACTCATTTAAATCTCTGAAGAGATCACTTACATTTTTAGTTAATAAATTATGCTT
ATTAGTTCGGGTATAAAATATTATGGTAGAGTGGTTTTCATAAATTTAAGATCTTTTACT
TGAGTACATATTCATTGTAAAAACTGTGTAAGTAAAAAAAATCCAAATCTTACCACCTGT
GGATAATCACTGTTAATATTTTGGTATATTTTCTTTTAGTACTTTTTCTTACATATTTTT
CAGCTTTATTAAGATCATGATATATTTATAAATTTGTGTCTCCTCAATTAACATTTTCTT
CATTTATTAAATGTTTATAGATAATATTTTTAATGTATGCATGGTAGTCCATAGTGTAGC
TATACCGTAATTTATTTTACCACTCTTCTCTCTTGGATATTTAGGTTGTGTAAACATTTT
AACAAATAAAATTAATTCTCTGATGAAAAAAAAAAAGCAAAAGCTTGTTCTGTGTTTTAC
ATTATTTCATCTTTTTATTCTTAGAAATGAAATTGCTTGGTCAAAGATTGTACATACTTC
TGAGGCTTAATACATATTGTCAAATTGCTCTTTAGAAAATACTTTTCTAAAATTTATTTT
TCTTCTCTATTGTCATGAACACCGTCTTTCAGGGAATTATGAATGGTAGTTATATTTGAA
GTTTAAATTCAAGTTATAATTTAACTCAACAGTGAACACTACTTTGTAAAATGAAGTATA
TGAGAAGACTGTATCAAGAACAGGATTAGATCTTTATTTGAAATGGAAGTGCACTGGGTT
TCACCAATGGGTATTTCCTCTGTTCCCCTAATTTCCAGAGTTGAAGCTCTTTGGCAGTCT
CACAGGTCATGC

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               13-1032, gnl|bosTau2|chr1 (85723431-85724419)
               

               
               13-1032, gnl|Hg17|chr3 (137594723-137593371)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               13-1032, gnl|bosTau2|chr1 (85723431-85724419)
               

               
               13-1032, gnl|Hg17|chr3 (137594723-137593371)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fco (0.314416)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.314416)

	13-1032, gnl\|bosTau2\|chr1 (85723431-85724419)
	13-1032, gnl\|Hg17\|chr3 (137594723-137593371)