Non-Coding RNA Search

Ss1.1-rpfco0134_j20.5

Sequence:


               
               ACTTGCTGGGAGAGGTTTGAACAAGTCATATACATGGCGTTCCATGGTCTTCACTGTTCC
ACCTTGCCATTGAACTTGTCTCCCAGAGGAAAAAGAAATATGGTATTTTGGAGCTAAATT
GAAGATGTTAATTGAACATCTACACATTGAAGTATGTATTCTTGTGTAAATGGGATGATC
TCCTGGGAATAGGACCTGCGATTGATGTTAGTGATTACTGATGATGGGAAACTGGTAGTG
CTGGTCCAGTTAACATCTCTAGTATGTTCCTGGTTAGAATGAGTCAGCAAAGATTATTTT
ATTCTATTGTGTGGTTCATTCTGTGTTACTTTATTTTTGTATTATTATGACTGCTAAGTG
ATTATTCTGTGTCTGTTTTTCAAAATGCTCTATGGTTTATATTTTTTAAAAGGTTATGAA
ATAAAAAGTAATTATATGTAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTTGCTGGGAGAGGTTTGAACAAGTCATATACATGGCGTTCCATGGTCTTCACTGTTCC
ACCTTGCCATTGAACTTGTCTCCCAGAGGAAAAAGAAATATGGTATTTTGGAGCTAAATT
GAAGATGTTAATTGAACATCTACACATTGAAGTATGTATTCTTGTGTAAATGGGATGATC
TCCTGGGAATAGGACCTGCGATTGATGTTAGTGATTACTGATGATGGGAAACTGGTAGTG
CTGGTCCAGTTAACATCTCTAGTATGTTCCTGGTTAGAATGAGTCAGCAAAGATTATTTT
ATTCTATTGTGTGGTTCATTCTGTGTTACTTTATTTTTGTATTATTATGACTGCTAAGTG
ATTATTCTGTGTCTGTTTTTCAAAATGCTCTATGGTTTATATTTTTTAAAAGGTTATGAA
ATAAAAAGTAATTATATGTAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               17-426, gnl|bosTau2|chr6 (965195-965607)
               

               
               17-426, gnl|Hg17|chr4 (123038127-123037712)
               

               
               17-426, gnl|Mm7|chr3 (36326890-36326527)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               17-426, gnl|bosTau2|chr6 (965195-965607)
               

               
               17-426, gnl|Hg17|chr4 (123038127-123037712)
               

               
               17-426, gnl|Mm7|chr3 (36326890-36326527)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fco (0.78604)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.78604)

	17-426, gnl\|bosTau2\|chr6 (965195-965607)
	17-426, gnl\|Hg17\|chr4 (123038127-123037712)
	17-426, gnl\|Mm7\|chr3 (36326890-36326527)